Mercurial > repos > iuc > rnaquast
comparison test-data/test_07_short_report.tab @ 5:f89e3c318453 draft
planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
| author | iuc |
|---|---|
| date | Wed, 07 Jun 2023 12:02:03 +0000 |
| parents | |
| children |
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| 4:f9f2ad782d8f | 5:f89e3c318453 |
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| 1 METRICS/TRANSCRIPTS transcriptome01 | |
| 2 Genes 1 | |
| 3 Avg. number of exons per isoform 1.0 | |
| 4 Transcripts 1 | |
| 5 Transcripts > 500 bp 1 | |
| 6 Transcripts > 1000 bp 1 | |
| 7 Aligned 1 | |
| 8 Uniquely aligned 0 | |
| 9 Multiply aligned 1 | |
| 10 Unaligned 0 | |
| 11 Avg. aligned fraction 1.0 | |
| 12 Avg. alignment length 5369.0 | |
| 13 Avg. mismatches per transcript 0.0 | |
| 14 Misassemblies 0 | |
| 15 Database coverage 1.0 | |
| 16 Duplication ratio 4.0 | |
| 17 Relative database coverage 1.0 | |
| 18 5000%-assembled genes 0 | |
| 19 9500%-assembled genes 0 | |
| 20 5000%-covered genes 0 | |
| 21 9500%-covered genes 0 | |
| 22 5000%-assembled isoforms 0 | |
| 23 9500%-assembled isoforms 0 | |
| 24 5000%-covered isoforms 0 | |
| 25 9500%-covered isoforms 0 | |
| 26 Mean isoform coverage 1.0 | |
| 27 Mean isoform assembly 1.0 | |
| 28 5000%-matched 0 | |
| 29 9500%-matched 0 | |
| 30 Unannotated 0 | |
| 31 Mean fraction of transcript matched 1.0 |