Mercurial > repos > iuc > rnaquast

comparison rna_quast.xml @ 8:f73ab5187eed draft default tip

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planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit 140ef122cde10b77c9c9466cf8464c1bce6599e9
author iuc
date Fri, 30 Aug 2024 14:12:04 +0000
parents 3125faf00ffd
children
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7:3125faf00ffd 8:f73ab5187eed
413 <element name="transcriptome01.paralogs" file="test_08_paralogs.fasta" ftype="fasta"/> 413 <element name="transcriptome01.paralogs" file="test_08_paralogs.fasta" ftype="fasta"/>
414 </output_collection> 414 </output_collection>
415 <output_collection name="list_logs" type="list" count="14"> 415 <output_collection name="list_logs" type="list" count="14">
416 <element name="STAR.out" ftype="txt"> 416 <element name="STAR.out" ftype="txt">
417 <assert_contents> 417 <assert_contents>
418 <has_text text="STAR --runThreadN"/> 418 <has_text_matching expression="STAR.* --runThreadN"/>
419 <has_text text="finished successfully"/> 419 <has_text text="finished successfully"/>
420 </assert_contents> 420 </assert_contents>
421 </element> 421 </element>
422 <element name="gmap_build.out" ftype="txt"> 422 <element name="gmap_build.out" ftype="txt">
423 <assert_contents> 423 <assert_contents>
462 <element name="transcriptome01.paralogs" file="test_08_paralogs.fasta" ftype="fasta"/> 462 <element name="transcriptome01.paralogs" file="test_08_paralogs.fasta" ftype="fasta"/>
463 </output_collection> 463 </output_collection>
464 <output_collection name="list_logs" type="list" count="14"> 464 <output_collection name="list_logs" type="list" count="14">
465 <element name="STAR.out" ftype="txt"> 465 <element name="STAR.out" ftype="txt">
466 <assert_contents> 466 <assert_contents>
467 <has_text text="STAR --runThreadN"/> 467 <has_text_matching expression="STAR.* --runThreadN"/>
468 <has_text text="finished successfully"/> 468 <has_text text="finished successfully"/>
469 </assert_contents> 469 </assert_contents>
470 </element> 470 </element>
471 <element name="gmap_build.out" ftype="txt"> 471 <element name="gmap_build.out" ftype="txt">
472 <assert_contents> 472 <assert_contents>