Mercurial > repos > iuc > samtools_merge

diff samtools_merge.xml @ 6:a7617eb92baf draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_merge commit c508c3af0f4121dcc38e0be63db00a604e997b8a
author iuc
date Thu, 19 Jun 2025 13:00:31 +0000
parents 65a38e8c8e2a
children
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--- a/samtools_merge.xml	Sun Sep 08 03:26:24 2024 +0000
+++ b/samtools_merge.xml	Thu Jun 19 13:00:31 2025 +0000
@@ -110,8 +110,8 @@
         <!--Merge 4 - merge all presented on the command line, combine PG and RG rather than dedup -->
         <test>
             <param name="bamfiles" value="test_input_1_a.bam,test_input_1_b.bam" />
-            <param name="idrg" value="-c" />
-            <param name="idpg" value="-p" />
+            <param name="idrg" value="true" />
+            <param name="idpg" value="true" />
             <output name="output" file="4.merge.expected.bam" ftype="bam" lines_diff="16" />
         </test>
         <!-- Merge 5 - ID and SN with regex in them (probably not necessary for the galaxy tool because just different input) -->