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comparison samtools_view.xml @ 13:0dbf49c414ae draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_view commit 1354b1358df89a922c3243f7e27ce789094b8644"
author iuc
date Sun, 19 Dec 2021 15:58:19 +0000
parents c370440f901e
children 5826298f6a73
comparison
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12:c370440f901e 13:0dbf49c414ae
1 <tool id="samtools_view" name="Samtools view" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> 1 <tool id="samtools_view" name="Samtools view" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@">
2 <description>- reformat, filter, or subsample SAM, BAM or CRAM</description> 2 <description>- reformat, filter, or subsample SAM, BAM or CRAM</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 <token name="@REF_DATA@"> 5 <token name="@REF_DATA@">
6 ## additional reference data 6 ## additional reference data
35 <when value="cram" /> 35 <when value="cram" />
36 </conditional> 36 </conditional>
37 </xml> 37 </xml>
38 </macros> 38 </macros>
39 <expand macro="requirements"> 39 <expand macro="requirements">
40 <requirement type="package">gawk</requirement> 40 <requirement type="package" version="5.1.0">gawk</requirement>
41 </expand> 41 </expand>
42 <expand macro="stdio"/> 42 <expand macro="stdio"/>
43 <expand macro="version_command"/> 43 <expand macro="version_command"/>
44 <command><![CDATA[ 44 <command><![CDATA[
45 @ADDTHREADS@ 45 @ADDTHREADS@