comparison test-data/sbol_lycopene_output.xml @ 0:1a75fa306c76 draft default tip

planemo upload commit dd818e990b23b010abe4843aaaa7315606b06bd6
author iuc
date Sat, 15 Oct 2022 21:21:53 +0000
parents
children
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-1:000000000000 0:1a75fa306c76
1 <?xml version="1.0" ?>
2 <rdf:RDF xmlns:sys-bio="http://sys-bio.org#" xmlns:sbol="http://sbols.org/v2#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:prov="http://www.w3.org/ns/prov#">
3 <sbol:ComponentDefinition rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_30000_rbs/1">
4 <sbol:displayId>P21687_30000_rbs</sbol:displayId>
5 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_30000_rbs"/>
6 <sbol:role rdf:resource="http://identifiers.org/so/SO:0000139"/>
7 <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
8 <sbol:version>1</sbol:version>
9 </sbol:ComponentDefinition>
10 <sbol:ComponentDefinition rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/1">
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12 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene"/>
13 <sbol:role rdf:resource="http://identifiers.org/so/SO:0000704"/>
14 <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
15 <sbol:type rdf:resource="http://identifiers.org/so/SO:0000987"/>
16 <sbol:version>1</sbol:version>
17 <sbol:component>
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20 <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_5_prime_assembly/1"/>
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22 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_5_prime_assembly_0"/>
23 <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
24 <sbol:version>1</sbol:version>
25 </sbol:Component>
26 </sbol:component>
27 <sbol:component>
28 <sbol:Component rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_rbs_0/1">
29 <sbol:access rdf:resource="http://sbols.org/v2#public"/>
30 <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_rbs/1"/>
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32 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_rbs_0"/>
33 <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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35 </sbol:Component>
36 </sbol:component>
37 <sbol:component>
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42 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_cds_0"/>
43 <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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45 </sbol:Component>
46 </sbol:component>
47 <sbol:component>
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50 <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_3_prime_assembly/1"/>
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52 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_3_prime_assembly_0"/>
53 <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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55 </sbol:Component>
56 </sbol:component>
57 <sbol:sequenceConstraint>
58 <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_0/1">
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60 <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_rbs_0/1"/>
61 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_0"/>
62 <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
63 <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_5_prime_assembly_0/1"/>
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65 </sbol:SequenceConstraint>
66 </sbol:sequenceConstraint>
67 <sbol:sequenceConstraint>
68 <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_1/1">
69 <sbol:displayId>constraint_1</sbol:displayId>
70 <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_cds_0/1"/>
71 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_1"/>
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75 </sbol:SequenceConstraint>
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77 <sbol:sequenceConstraint>
78 <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_2/1">
79 <sbol:displayId>constraint_2</sbol:displayId>
80 <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_3_prime_assembly_0/1"/>
81 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_2"/>
82 <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
83 <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_cds_0/1"/>
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91 <sbol:role rdf:resource="http://identifiers.org/so/SO:0000316"/>
92 <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
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94 </sbol:ComponentDefinition>
95 <sbol:ComponentDefinition rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_rbs/1">
96 <sbol:displayId>P21687_10000_rbs</sbol:displayId>
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104 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene"/>
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106 <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
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109 <sbol:component>
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111 <sbol:access rdf:resource="http://sbols.org/v2#public"/>
112 <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_5_prime_assembly/1"/>
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114 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_5_prime_assembly_0"/>
115 <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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124 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_rbs_0"/>
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144 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_3_prime_assembly_0"/>
145 <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
146 <sbol:version>1</sbol:version>
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148 </sbol:component>
149 <sbol:sequenceConstraint>
150 <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_0/1">
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152 <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_rbs_0/1"/>
153 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_0"/>
154 <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
155 <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_5_prime_assembly_0/1"/>
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160 <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_1/1">
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162 <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_cds_0/1"/>
163 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_1"/>
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165 <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_rbs_0/1"/>
166 <sbol:version>1</sbol:version>
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168 </sbol:sequenceConstraint>
169 <sbol:sequenceConstraint>
170 <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_2/1">
171 <sbol:displayId>constraint_2</sbol:displayId>
172 <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_3_prime_assembly_0/1"/>
173 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_2"/>
174 <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
175 <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_cds_0/1"/>
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192 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/rxn_3_5_prime_assembly_0"/>
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202 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/P21685_20000_rbs_0"/>
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213 <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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222 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/rxn_3_3_prime_assembly_0"/>
223 <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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227 <sbol:sequenceConstraint>
228 <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/constraint_0/1">
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231 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/constraint_0"/>
232 <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
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251 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/constraint_2"/>
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275 <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_5_prime_assembly/1"/>
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277 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_10000_gene/rxn_3_5_prime_assembly_0"/>
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285 <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_10000_rbs/1"/>
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1510 <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21683_30000_gene/rxn_3_3_prime_assembly_0/1"/>
1511 <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21683_30000_gene/constraint_2"/>
1512 <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
1513 <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21683_30000_gene/P21683_30000_cds_2/1"/>
1514 <sbol:version>1</sbol:version>
1515 </sbol:SequenceConstraint>
1516 </sbol:sequenceConstraint>
1517 </sbol:ComponentDefinition>
1518 </rdf:RDF>