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planemo upload commit dd818e990b23b010abe4843aaaa7315606b06bd6
author iuc
date Sat, 15 Oct 2022 21:21:53 +0000
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<?xml version="1.0" encoding="UTF-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" level="3" version="1" groups:required="false" fbc:required="false">
  <model metaid="f9b1ff022aa2133fc1e5e5d1fbac90ac29a744e960a2774be646bc71471ed597" id="RP_model_002_0001" name="002_0001" substanceUnits="mole" timeUnits="second" extentUnits="mole" fbc:strict="true">
    <listOfCompartments>
      <compartment metaid="_2e7d2c03a9507ae265ecf5b5356885a53393a2029d241394997265a1a25aefc6" sboTerm="SBO:0000290" id="c" name="cytosol" size="1" constant="true">
        <annotation>
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              <bqbiol:is>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c"/>
                  <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c_c"/>
                  <rdf:li rdf:resource="http://identifiers.org/metanetx.compartment/MNXC3"/>
                  <rdf:li rdf:resource="http://identifiers.org/seed/c"/>
                  <rdf:li rdf:resource="http://identifiers.org/seed/c0"/>
                  <rdf:li rdf:resource="http://identifiers.org/seed/cytosol"/>
                  <rdf:li rdf:resource="http://identifiers.org/name/cytosol"/>
                </rdf:Bag>
              </bqbiol:is>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </compartment>
    </listOfCompartments>
    <listOfSpecies>
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                  <brsynth:value value="-1.0"/>
                </brsynth:fba_fraction_shadow_price>
                <brsynth:thermo_standard_dg_formation>
                  <brsynth:value value="936.7141451846444"/>
                  <brsynth:units value="kilojoule / mole"/>
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        </annotation>
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                  <brsynth:units value="kilojoule / mole"/>
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                <brsynth:inchi value="InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)"/>
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                <brsynth:thermo_standard_dg_formation>
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                  <brsynth:units value="kilojoule / mole"/>
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                <brsynth:thermo_standard_dg_formation>
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        </annotation>
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                <brsynth:thermo_standard_dg_formation>
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                  <brsynth:units value="kilojoule / mole"/>
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            </rdf:BRSynth>
          </rdf:RDF>
        </annotation>
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                <brsynth:inchi value="InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)"/>
                <brsynth:inchikey value="NUHSROFQTUXZQQ-UHFFFAOYSA-N"/>
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          </rdf:RDF>
        </annotation>
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        </annotation>
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    </listOfSpecies>
    <listOfParameters>
      <parameter metaid="dc937b59892604f5a86ac96936cd7ff09e25f18ae6b758e8014a24c7fa039e91" sboTerm="SBO:0000625" id="BRS_FBC_10000_0" value="10000" constant="true"/>
      <parameter metaid="dc937b59892604f5a86ac96936cd7ff09e25f18ae6b758e8014a24c7fa039e91" sboTerm="SBO:0000625" id="BRS_FBC_0_0" value="0" constant="true"/>
    </listOfParameters>
    <listOfReactions>
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                </brsynth:fba_biomass>
                <brsynth:fba_fraction>
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                  <brsynth:units value="milimole / gDW / hour"/>
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                <brsynth:thermo_dG0_prime>
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                  <brsynth:error value="4.6679220722885155"/>
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                </brsynth:thermo_dG0_prime>
                <brsynth:thermo_dGm_prime>
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                </brsynth:thermo_dGm_prime>
                <brsynth:thermo_dG_prime>
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                </brsynth:thermo_dG_prime>
                <brsynth:thermo_dG>
                  <brsynth:value value="-1881.1378556154446"/>
                  <brsynth:error value="4.6679220722885155"/>
                  <brsynth:units value="kilojoule / mole"/>
                </brsynth:thermo_dG>
              </brsynth:brsynth>
            </rdf:BRSynth>
          </rdf:RDF>
        </annotation>
        <listOfReactants>
          <speciesReference species="MNXM100" stoichiometry="1" constant="true"/>
          <speciesReference species="MNXM83" stoichiometry="1" constant="true"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="CMPD_0000000003" stoichiometry="1" constant="true"/>
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      </reaction>
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                  <brsynth:units value="kilojoule / mole"/>
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                <brsynth:thermo_dG_prime>
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                  <brsynth:error value="11.000567449695138"/>
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                <brsynth:thermo_dG>
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                  <brsynth:units value="kilojoule / mole"/>
                </brsynth:thermo_dG>
              </brsynth:brsynth>
            </rdf:BRSynth>
          </rdf:RDF>
        </annotation>
        <listOfReactants>
          <speciesReference species="CMPD_0000000003" stoichiometry="1" constant="true"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="CMPD_0000000001" stoichiometry="1" constant="true"/>
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        </annotation>
        <listOfReactants>
          <speciesReference species="CMPD_0000000001" stoichiometry="1" constant="true"/>
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        </listOfReactants>
        <listOfProducts>
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    </listOfReactions>
    <groups:listOfGroups>
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  </model>
</sbml>