annotate test-data/scHicInfo/matrices_info.txt @ 2:295558e266d0 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit d350f8e73ae518245a21f9720f8282f06eb9cc5d
author iuc
date Fri, 14 Apr 2023 14:21:12 +0000
parents 104bedd292cd
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
1 Filename: test_matrix.mcool
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
2 Contains 20 single-cell matrices
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
3 The information stored via cooler.info of the first cell is:
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
4
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
5 bin-size 1000000
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
6 bin-type fixed
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
7 creation-date 2019-05-16T11:46:31.826214
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
8 format HDF5::Cooler
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
9 format-url https://github.com/mirnylab/cooler
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
10 format-version 3
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
11 generated-by cooler-0.8.3
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
12 genome-assembly unknown
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
13 metadata {}
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
14 nbins 2744
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
15 nchroms 35
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
16 nnz 55498
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
17 storage-mode symmetric-upper
104bedd292cd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit 0536fdef4cfc6315a0730b55f766e31d1986bedb"
iuc
parents:
diff changeset
18 sum 486056