Mercurial > repos > iuc > semibin_generate_sequence_features
view test-data/taxonomy_7.tsv @ 1:0ae1a2636de5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/semibin commit 59a7b7a334fd2c3aca6163c2ff11d18ef654ab9d
| author | iuc |
|---|---|
| date | Mon, 27 Mar 2023 08:24:19 +0000 |
| parents | 07bf5268724f |
| children |
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g1k_0 13548 genus Treponema A 4 4 4 1.000 d_Bacteria;p_Spirochaetota;c_Spirochaetia;o_Treponematales;f_Treponemataceae;g_Treponema A g1k_1 566 species Prevotella intermedia 11 9 6 0.520 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella;s_Prevotella intermedia g1k_2 566 species Prevotella intermedia 15 15 10 0.980 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella;s_Prevotella intermedia g1k_3 206 order Bacteroidales 5 5 5 1.000 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales g1k_4 566 species Prevotella intermedia 21 19 11 0.640 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella;s_Prevotella intermedia g1k_5 206 order Bacteroidales 18 16 12 0.730 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales g1k_6 206 order Bacteroidales 22 22 14 0.670 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales g1k_7 566 species Prevotella intermedia 8 8 5 0.540 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella;s_Prevotella intermedia g1k_8 209 species Bacteroides fragilis 6 5 2 0.640 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides fragilis g1k_9 565 genus Prevotella 27 25 21 0.870 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella g2k_0 13548 genus Treponema A 3 3 3 1.000 d_Bacteria;p_Spirochaetota;c_Spirochaetia;o_Treponematales;f_Treponemataceae;g_Treponema A g2k_1 209 species Bacteroides fragilis 9 9 4 0.930 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides fragilis g2k_2 565 genus Prevotella 9 9 9 1.000 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella g2k_3 565 genus Prevotella 8 8 7 0.840 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella g2k_4 209 species Bacteroides fragilis 10 8 4 0.500 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides fragilis g2k_5 8420 species Treponema D porcinum 2 1 1 1.000 d_Bacteria;p_Spirochaetota;c_Spirochaetia;o_Treponematales;f_Treponemataceae;g_Treponema D;s_Treponema D porcinum g2k_6 209 species Bacteroides fragilis 58 52 32 0.730 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides fragilis g2k_7 1193 species Bacteroides eggerthii 14 14 10 0.790 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides eggerthii g2k_8 566 species Prevotella intermedia 33 32 19 0.600 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella;s_Prevotella intermedia g2k_9 566 species Prevotella intermedia 15 15 7 0.600 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella;s_Prevotella intermedia g3k_0 22555 species UBA1066 sp002316215 3 2 1 0.940 d_Bacteria;p_Firmicutes A;c_Clostridia;o_Lachnospirales;f_Lachnospiraceae;g_UBA1066;s_UBA1066 sp002316215 g3k_1 11375 species Treponema B denticola A 7 7 5 0.610 d_Bacteria;p_Spirochaetota;c_Spirochaetia;o_Treponematales;f_Treponemataceae;g_Treponema B;s_Treponema B denticola A g3k_2 208 genus Bacteroides 22 19 13 0.790 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides g3k_3 288 family Treponemataceae 5 5 5 1.000 d_Bacteria;p_Spirochaetota;c_Spirochaetia;o_Treponematales;f_Treponemataceae g3k_4 208 genus Bacteroides 11 11 7 0.740 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides g3k_5 208 genus Bacteroides 46 40 24 0.670 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides g3k_6 2 superkingdom Bacteria 7 7 6 1.000 d_Bacteria g3k_7 209 species Bacteroides fragilis 2 2 1 0.500 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides fragilis g3k_8 566 species Prevotella intermedia 14 14 10 0.750 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella;s_Prevotella intermedia g3k_9 565 genus Prevotella 52 51 45 0.860 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella g4k_0 565 genus Prevotella 10 9 5 0.820 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella g4k_1 565 genus Prevotella 36 35 32 0.890 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella g4k_2 565 genus Prevotella 34 33 31 0.920 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella g4k_3 209 species Bacteroides fragilis 13 12 4 0.560 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides fragilis g4k_4 209 species Bacteroides fragilis 4 4 3 0.990 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides fragilis g4k_5 208 genus Bacteroides 24 20 18 0.940 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides g4k_6 1193 species Bacteroides eggerthii 3 3 3 1.000 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_Bacteroides eggerthii g4k_7 288 family Treponemataceae 4 4 3 0.670 d_Bacteria;p_Spirochaetota;c_Spirochaetia;o_Treponematales;f_Treponemataceae g4k_8 565 genus Prevotella 9 9 7 0.530 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella g4k_9 566 species Prevotella intermedia 11 10 6 0.790 d_Bacteria;p_Bacteroidota;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Prevotella;s_Prevotella intermedia