Mercurial > repos > iuc > seqkit_fx2tab

comparison seqkit_fx2tab.xml @ 10:654a2f089252 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqkit commit 89cc1cb215aa5dc5ef6364bf13bbb1978367dce3
author iuc
date Tue, 15 Jul 2025 19:35:45 +0000
parents 1dc73570fd5a
children b91a71153b2f
comparison
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9:2fa2353fe3ab 10:654a2f089252
49 <param name="input" value="input1.fastq.gz" ftype="fastqsanger.gz"/> 49 <param name="input" value="input1.fastq.gz" ftype="fastqsanger.gz"/>
50 <output name="output" file="fx2tab_output1.tabular" ftype="tabular"/> 50 <output name="output" file="fx2tab_output1.tabular" ftype="tabular"/>
51 </test> 51 </test>
52 <test expect_num_outputs="1"> 52 <test expect_num_outputs="1">
53 <param name="input" value="input1.fastq.gz" ftype="fastqsanger.gz"/> 53 <param name="input" value="input1.fastq.gz" ftype="fastqsanger.gz"/>
54 <param name="avg_qual" value="--avg-qual"/> 54 <param name="avg_qual" value="true"/>
55 <param name="header_line" value="--header-line"/> 55 <param name="header_line" value="true"/>
56 <param name="length" value="--length"/> 56 <param name="length" value="true"/>
57 <param name="name" value="--name"/> 57 <param name="name" value="true"/>
58 <param name="only_id" value="--only-id"/> 58 <param name="only_id" value="true"/>
59 <output name="output" file="fx2tab_output2.tabular" ftype="tabular"/> 59 <output name="output" file="fx2tab_output2.tabular" ftype="tabular"/>
60 </test> 60 </test>
61 <test expect_num_outputs="1"> 61 <test expect_num_outputs="1">
62 <param name="input" value="input1.fasta.gz" ftype="fasta.gz"/> 62 <param name="input" value="input1.fasta.gz" ftype="fasta.gz"/>
63 <output name="output" file="fx2tab_output3.tabular" ftype="tabular"/> 63 <output name="output" file="fx2tab_output3.tabular" ftype="tabular"/>
64 </test> 64 </test>
65 <test expect_num_outputs="1"> 65 <test expect_num_outputs="1">
66 <param name="input" value="input1.fasta.gz" ftype="fasta.gz"/> 66 <param name="input" value="input1.fasta.gz" ftype="fasta.gz"/>
67 <param name="alphabet" value="--alphabet"/> 67 <param name="alphabet" value="true"/>
68 <param name="avg_qual" value="--avg-qual"/> 68 <param name="avg_qual" value="true"/>
69 <param name="gc" value="--gc"/> 69 <param name="gc" value="true"/>
70 <param name="gc_skew" value="--gc-skew"/> 70 <param name="gc_skew" value="true"/>
71 <param name="header_line" value="--header-line"/> 71 <param name="header_line" value="true"/>
72 <param name="length" value="--length"/> 72 <param name="length" value="true"/>
73 <param name="name" value="--name"/> 73 <param name="name" value="true"/>
74 <param name="no_qual" value="--no-qual"/> 74 <param name="no_qual" value="true"/>
75 <param name="only_id" value="--only-id"/> 75 <param name="only_id" value="true"/>
76 <param name="seq_hash" value="--seq-hash"/> 76 <param name="seq_hash" value="true"/>
77 <output name="output" file="fx2tab_output4.tabular" ftype="tabular"/> 77 <output name="output" file="fx2tab_output4.tabular" ftype="tabular"/>
78 </test> 78 </test>
79 </tests> 79 </tests>
80 <help> 80 <help>
81 **What it does** 81 **What it does**