Mercurial > repos > iuc > seqprep
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqprep commit 06828a419d1bf8546382b7c687a76b65a577e736
| author | iuc |
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| date | Thu, 15 Feb 2024 14:23:13 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.md Thu Feb 15 14:23:13 2024 +0000 @@ -0,0 +1,15 @@ +# SeqPrep Tool Documentation + +## Overview + +SeqPrep is a bioinformatics tool primarily used for processing paired-end Illumina reads. It excels in merging overlapping reads and trimming adapter sequences, making it a valuable asset in genomic sequence analysis. Its efficient handling of paired-end data ensures high-quality preparation for downstream analysis. + +## Key Features + +- **Read Merging**: Seamlessly merges overlapping paired-end Illumina reads into longer, single reads. +- **Adapter Trimming**: Efficiently trims adapter sequences from read ends to improve data quality. +- **Quality Control**: Offers options for quality score cutoff and minimum read length, enhancing the integrity of output data. + +## Usage + +For a detailed tutorial on how to use SeqPrep, please refer to the [SeqPrep Tutorial](https://github.com/jstjohn/SeqPrep/tree/master).