Mercurial > repos > iuc > seqtk
comparison seqtk_mergefa.xml @ 9:4b494533146a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 2f75805e2e6cfa2af15076e6f4929b87631360a6
author | iuc |
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date | Sat, 09 Dec 2023 11:14:21 +0000 |
parents | 3da72230c066 |
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8:3da72230c066 | 9:4b494533146a |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <tool id="seqtk_mergefa" name="seqtk_mergefa" version="@TOOL_VERSION@.1"> | 2 <tool id="seqtk_mergefa" name="seqtk_mergefa" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> |
3 <description>merge two FASTA/Q files</description> | 3 <description>merge two FASTA/Q files</description> |
4 <expand macro="bio_tools"/> | |
5 <macros> | 4 <macros> |
6 <import>macros.xml</import> | 5 <import>macros.xml</import> |
7 </macros> | 6 </macros> |
7 <expand macro="bio_tools"/> | |
8 <expand macro="requirements"/> | 8 <expand macro="requirements"/> |
9 <expand macro="stdio"/> | 9 <expand macro="stdio"/> |
10 <command><![CDATA[ | 10 <command><![CDATA[ |
11 seqtk mergefa | 11 seqtk mergefa |
12 -q $q | 12 -q $q |
26 <param argument="-m" type="boolean" truevalue="-m" falsevalue="" checked="false" label="Convert to lowercase when one of the input base is N" /> | 26 <param argument="-m" type="boolean" truevalue="-m" falsevalue="" checked="false" label="Convert to lowercase when one of the input base is N" /> |
27 <param argument="-r" type="boolean" truevalue="-r" falsevalue="" checked="false" label="Pick a random allele from het" /> | 27 <param argument="-r" type="boolean" truevalue="-r" falsevalue="" checked="false" label="Pick a random allele from het" /> |
28 <param argument="-h" type="boolean" truevalue="-h" falsevalue="" checked="false" label="Suppress hets in the input" /> | 28 <param argument="-h" type="boolean" truevalue="-h" falsevalue="" checked="false" label="Suppress hets in the input" /> |
29 </inputs> | 29 </inputs> |
30 <outputs> | 30 <outputs> |
31 <data name="default" format_source="in_fa1" label="Merger of $in_fa1.name and $in_fa2.name"/> | 31 <data name="default" format_source="in_fa1" label="${tool.name} on ${on_string}"/> |
32 </outputs> | 32 </outputs> |
33 <tests> | 33 <tests> |
34 <test> | 34 <test> |
35 <param name="in_fa1" value="seqtk_mergefa1.fa"/> | 35 <param name="in_fa1" value="seqtk_mergefa1.fa"/> |
36 <param name="in_fa2" value="seqtk_mergefa2.fa"/> | 36 <param name="in_fa2" value="seqtk_mergefa2.fa"/> |