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comparison seqwish.xml @ 2:d90d8d79bca9 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqwish/ commit 9e70ae101ba20a619ea12a044d3a161cafeb2fe1"
author iuc
date Wed, 21 Jul 2021 21:17:03 +0000
parents 189ae8d7e08e
children ca1fb032116d
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1:189ae8d7e08e 2:d90d8d79bca9
1 <tool id="seqwish" name="seqwish" version="@TOOL_VERSION@" > 1 <tool id="seqwish" name="seqwish" version="@TOOL_VERSION@" >
2 <description>Alignment to variation graph inducer</description> 2 <description>Alignment to variation graph inducer</description>
3 <macros> 3 <macros>
4 <token name="@TOOL_VERSION@">0.4.1</token> 4 <token name="@TOOL_VERSION@">0.7.1</token>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="@TOOL_VERSION@">seqwish</requirement> 7 <requirement type="package" version="@TOOL_VERSION@">seqwish</requirement>
8 </requirements> 8 </requirements>
9 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
44 44
45 <tests> 45 <tests>
46 <test> 46 <test>
47 <param name="seqs" value="A-3105.fa.gz" /> 47 <param name="seqs" value="A-3105.fa.gz" />
48 <param name="paf_alns" value="A-3105.paf.gz" /> 48 <param name="paf_alns" value="A-3105.paf.gz" />
49 <output name="out_gfa" md5="176f9b4be76a2e69550da9b9c39ac5eb" /> 49 <output name="out_gfa" md5="f82bea6331f62e86cce543c36fb4c1f6" />
50 </test> 50 </test>
51 <test> 51 <test>
52 <param name="seqs" value="A-3105.fa.gz" /> 52 <param name="seqs" value="A-3105.fa.gz" />
53 <param name="paf_alns" value="A-3105.paf.gz" /> 53 <param name="paf_alns" value="A-3105.paf.gz" />
54 <param name="r" value="3000" /> 54 <param name="r" value="3000" />
55 <param name="k" value="1" /> 55 <param name="k" value="1" />
56 <param name="B" value="1000000" /> 56 <param name="B" value="1000000" />
57 <output name="out_gfa" md5="176f9b4be76a2e69550da9b9c39ac5eb" /> 57 <output name="out_gfa" md5="f82bea6331f62e86cce543c36fb4c1f6" />
58 </test> 58 </test>
59 </tests> 59 </tests>
60 <help><![CDATA[ 60 <help><![CDATA[
61 These **seq**uences **wish** they were squished into a graph. 61 These **seq**uences **wish** they were squished into a graph.
62 62