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comparison seurat.xml @ 7:4c139a9415d7 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seurat commit 8f89414ecee8120447febc2902ff1ddbbd71e638"
author iuc
date Thu, 01 Oct 2020 22:52:35 +0000
parents 764f076e9d52
children 828324f3292f
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6:764f076e9d52 7:4c139a9415d7
1 <tool id="seurat" name="Seurat" version="@TOOL_VERSION@+galaxy2"> 1 <tool id="seurat" name="Seurat" version="@TOOL_VERSION@+galaxy0">
2 <description>- toolkit for exploration of single-cell RNA-seq data</description> 2 <description>- toolkit for exploration of single-cell RNA-seq data</description>
3 <macros> 3 <macros>
4 <token name="@TOOL_VERSION@">3.1.5</token> 4 <token name="@TOOL_VERSION@">3.2.2</token>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="@TOOL_VERSION@">r-seurat</requirement> 7 <requirement type="package" version="@TOOL_VERSION@">r-seurat</requirement>
8 <requirement type="package" version="2.2">r-rmarkdown</requirement> 8 <requirement type="package" version="2.4">r-rmarkdown</requirement>
9 <!-- Need to pin R-base due to
10 *** caught segfault ***
11 address (nil), cause 'memory not mapped'
12
13 Traceback:
14 1: cairoVersion()
15 2: grSoftVersion()
16 -->
17 <requirement type="package" version="3.6">r-base</requirement>
18 </requirements> 9 </requirements>
19 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
20 #if "vln" in $meta.plots: 11 #if "vln" in $meta.plots:
21 #set $vln = 'T' 12 #set $vln = 'T'
22 #else 13 #else