Mercurial > repos > iuc > seurat_create

changeset 2:af8bdeb89691 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seurat_v5 commit 08d8b9adb080f075e6ad9f1ddb1ac8117762f1e7
author iuc
date Fri, 08 Nov 2024 19:47:49 +0000
parents a7af4acac32c
children
files create_seurat.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/create_seurat.xml	Tue Nov 05 11:54:55 2024 +0000
+++ b/create_seurat.xml	Fri Nov 08 19:47:49 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="seurat_create" name="Seurat Create" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
+<tool id="seurat_create" name="Seurat Create" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
     <description>- Prepare data for the pipeline</description>
     <macros>
         <import>macros.xml</import>
@@ -237,7 +237,7 @@
                         <param name="matrix" type="data" format="mtx" label="Counts matrix with features as rows, cells as columns (.mtx)"/>
                         <param name="citeseq_boolean" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Matrix includes citeseq data"/>
                         <param name="gene_names" type="data" format="tsv,tabular" label="List of gene names (for rows)"/>
-                        <param name="cell_barcodes" type="data" format="tsv,tabular" label="List of cell barcodes (for columns)"/>
+                        <param name="cell_barcodes" type="data" format="tsv,tabular,txt" label="List of cell barcodes (for columns)"/>
                         <param name="gene_column" type="integer" value="2" label="Column of gene table to use as gene names" help="(gene.column)"/>
                         <param name="cell_column" type="integer" value="1" label="Column of cell table to use as cell names" help="(cell.column)"/>
                         <param name="unique_features" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="true" label="Make feature names unique" help="(unique.features)"/>
@@ -535,4 +535,4 @@
 
     ]]></help>
     <expand macro="citations"/>
-</tool>
\ No newline at end of file
+</tool>