Mercurial > repos > iuc > seurat_reduce_dimension

changeset 1:46ed93e8da30 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seurat_v5 commit 566984b588e88225f0b3f2dae88c6fd084315e7c
author iuc
date Tue, 05 Nov 2024 11:55:04 +0000
parents e49429e8d6dd
children
files macros.xml reduce_dimensions.xml
diffstat 2 files changed, 7 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Wed Sep 11 10:21:02 2024 +0000
+++ b/macros.xml	Tue Nov 05 11:55:04 2024 +0000
@@ -2,6 +2,11 @@
     <token name="@TOOL_VERSION@">5.0</token>
     <token name="@VERSION_SUFFIX@">0</token>
     <token name="@PROFILE@">23.0</token>
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">seurat</xref>
+        </xrefs>
+      </xml>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">r-seurat</requirement>
@@ -141,7 +146,7 @@
         </data>
     </xml>
     <token name="@CMD_inspect_rds_outputs@"><![CDATA[
-write.table(inspect, 'inspect_out.tab', sep="\t", col.names = col.names, row.names = row.names, quote = FALSE)    
+write.table(inspect, 'inspect_out.tab', sep="\t", col.names = col.names, row.names = row.names, quote = FALSE)
     ]]>
     </token>
     <xml name="plot_out">
--- a/reduce_dimensions.xml	Wed Sep 11 10:21:02 2024 +0000
+++ b/reduce_dimensions.xml	Tue Nov 05 11:55:04 2024 +0000
@@ -3,6 +3,7 @@
     <macros>
         <import>macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements"/>
     <expand macro="version_command"/>
     <command detect_errors="exit_code"><![CDATA[