Mercurial > repos > iuc > snippy

comparison test-data/fna_ref/snps.gff @ 1:82f2b6f20fa2 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit c295a06009ccafd0c1dc8aba5dd87239795d2b61
author iuc
date Sat, 26 Jan 2019 14:36:48 -0500
parents c9a8ef2aa380
children 776ebd1239da
comparison
equal deleted inserted replaced
0:c9a8ef2aa380 1:82f2b6f20fa2
1 ##gff-version 3 1 ##gff-version 3
2 Wildtype snippy:3.2-dev variation 24388 24388 . . 0 note=snp A=>G G:22 A:0 2 Wildtype snippy:3.2-dev variation 24388 24388 . . 0 note=snp A=>G G:22 A:0
3 Wildtype snippy:3.2-dev variation 29479 29479 . . 0 note=snp T=>G G:21 T:0 3 Wildtype snippy:3.2-dev variation 29479 29479 . . 0 note=snp T=>G G:21 T:0
4 Wildtype snippy:3.2-dev variation 47299 47299 . . 0 note=snp T=>A A:24 T:0 4 Wildtype snippy:3.2-dev variation 47299 47299 . . 0 note=snp T=>A A:25 T:0
5 Wildtype snippy:3.2-dev variation 102969 102969 . . 0 note=snp G=>C C:16 G:0 5 Wildtype snippy:3.2-dev variation 102969 102969 . . 0 note=snp G=>C C:16 G:0
6 Wildtype snippy:3.2-dev variation 103048 103048 . . 0 note=snp T=>A A:20 T:0 6 Wildtype snippy:3.2-dev variation 103048 103048 . . 0 note=snp T=>A A:21 T:0
7 Wildtype snippy:3.2-dev variation 103379 103379 . . 0 note=del GAA=>GA GA:11 GAA:0 7 Wildtype snippy:3.2-dev variation 103379 103379 . . 0 note=del GAAAATAG=>GAAATAG GAAATAG:11 GAAAATAG:0
8 Wildtype snippy:3.2-dev variation 106602 106602 . . 0 note=snp T=>G G:21 T:0 8 Wildtype snippy:3.2-dev variation 106602 106602 . . 0 note=snp T=>G G:22 T:0
9 Wildtype snippy:3.2-dev variation 109833 109833 . . 0 note=snp T=>A A:16 T:0 9 Wildtype snippy:3.2-dev variation 106722 106722 . . 0 note=ins GTTTTTAAC=>GTTTTTTAAC GTTTTTTAAC:11 GTTTTTAAC:0
10 Wildtype snippy:3.2-dev variation 114540 114540 . . 0 note=del ATT=>AT AT:25 ATT:0 10 Wildtype snippy:3.2-dev variation 109833 109833 . . 0 note=snp T=>A A:17 T:0
11 Wildtype snippy:3.2-dev variation 129881 129881 . . 0 note=mnp GT=>AA AA:18 GT:0 11 Wildtype snippy:3.2-dev variation 114540 114540 . . 0 note=del ATTGTGA=>ATGTGA ATGTGA:26 ATTGTGA:0
12 Wildtype snippy:3.2-dev variation 129881 129881 . . 0 note=mnp GT=>AA AA:19 GT:0
12 Wildtype snippy:3.2-dev variation 138877 138877 . . 0 note=snp G=>C C:14 G:0 13 Wildtype snippy:3.2-dev variation 138877 138877 . . 0 note=snp G=>C C:14 G:0
13 Wildtype snippy:3.2-dev variation 138920 138920 . . 0 note=snp A=>G G:10 A:0 14 Wildtype snippy:3.2-dev variation 138920 138920 . . 0 note=snp A=>G G:10 A:0
15 Wildtype snippy:3.2-dev variation 138954 138954 . . 0 note=snp A=>G G:10 A:0
14 Wildtype snippy:3.2-dev variation 160547 160547 . . 0 note=del GTC=>GC GC:18 GTC:0 16 Wildtype snippy:3.2-dev variation 160547 160547 . . 0 note=del GTC=>GC GC:18 GTC:0
15 Wildtype snippy:3.2-dev variation 160552 160552 . . 0 note=del CTA=>CA CA:20 CTA:0 17 Wildtype snippy:3.2-dev variation 190866 190866 . . 0 note=del GTTTTCTTTAA=>GTTTCTTTAA GTTTCTTTAA:17 GTTTTCTTTAA:0
16 Wildtype snippy:3.2-dev variation 190866 190866 . . 0 note=del GTT=>GT GT:18 GTT:0