# HG changeset patch # User iuc # Date 1572916026 18000 # Node ID 4df82423ba61aa0f84f6a22da0040bee8719d32f # Parent 0aa87d97847f1425971f52e49762c8286b28c5a1 "planemo upload commit 1235e6893a7e0d9ea3a600204c515fec1810dd93" diff -r 0aa87d97847f -r 4df82423ba61 macros.xml --- a/macros.xml Fri Sep 13 05:45:21 2019 -0400 +++ b/macros.xml Mon Nov 04 20:07:06 2019 -0500 @@ -56,7 +56,7 @@ - 4.4.3 + 4.4.5 diff -r 0aa87d97847f -r 4df82423ba61 test-data/a_fna_ref_mincov_2_minqual_60.snps.txt --- a/test-data/a_fna_ref_mincov_2_minqual_60.snps.txt Fri Sep 13 05:45:21 2019 -0400 +++ b/test-data/a_fna_ref_mincov_2_minqual_60.snps.txt Mon Nov 04 20:07:06 2019 -0500 @@ -2,5 +2,5 @@ ReadFiles a_1.fastq a_2.fastq Reference reference.fasta ReferenceSize 700 -Software snippy 4.4.3 +Software snippy 4.4.5 VariantTotal 0 diff -r 0aa87d97847f -r 4df82423ba61 test-data/b_2_fna_ref_mincov_2_minqual_60.snps.gff --- a/test-data/b_2_fna_ref_mincov_2_minqual_60.snps.gff Fri Sep 13 05:45:21 2019 -0400 +++ b/test-data/b_2_fna_ref_mincov_2_minqual_60.snps.gff Mon Nov 04 20:07:06 2019 -0500 @@ -1,2 +1,2 @@ ##gff-version 3 -reference snippy:4.4.3 variation 4 4 . . 0 note=snp A=>T T:5 A:0 +reference snippy:4.4.5 variation 4 4 . . 0 note=snp A=>T T:5 A:0 diff -r 0aa87d97847f -r 4df82423ba61 test-data/b_fna_ref_mincov_2_minqual_60.snps.gff --- a/test-data/b_fna_ref_mincov_2_minqual_60.snps.gff Fri Sep 13 05:45:21 2019 -0400 +++ b/test-data/b_fna_ref_mincov_2_minqual_60.snps.gff Mon Nov 04 20:07:06 2019 -0500 @@ -1,2 +1,2 @@ ##gff-version 3 -reference snippy:4.4.3 variation 4 4 . . 0 note=snp A=>T T:10 A:0 +reference snippy:4.4.5 variation 4 4 . . 0 note=snp A=>T T:10 A:0 diff -r 0aa87d97847f -r 4df82423ba61 test-data/b_fna_ref_mincov_2_minqual_60.snps.txt --- a/test-data/b_fna_ref_mincov_2_minqual_60.snps.txt Fri Sep 13 05:45:21 2019 -0400 +++ b/test-data/b_fna_ref_mincov_2_minqual_60.snps.txt Mon Nov 04 20:07:06 2019 -0500 @@ -2,6 +2,6 @@ ReadFiles b_1.fastq b_2.fastq Reference reference.fasta ReferenceSize 700 -Software snippy 4.4.3 +Software snippy 4.4.5 Variant-SNP 1 VariantTotal 1