Mercurial > repos > iuc > snp_dists

comparison test-data/input1.fasta @ 0:1959cc43b414 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-dists commit d47295a437bdca2a1d248e8210dddea530bb6d12"
author iuc
date Sat, 19 Oct 2019 05:08:45 -0400
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equal deleted inserted replaced
-1:000000000000 0:1959cc43b414
1 >MTB_anc foo
2 ccccNGGAGCCCGGTAGGCCGTCGGATGCGTCCCGCCCGGCGCGCCGTCCGCCACTCGGT
3 CGCACGCCCGGCCGGCCCCTAATGTTCGGCCACACCGAGCGGGCGAGAGGGGTGACTCGG
4 AGTCCCGGAGGCCGCCCCGGCCGAGTGCGTCGCCCACGCCGCGGCTTCCATGTGACATGC
5 TGGCCGAGCAGACAGAAGACGGGACGATCGCCCTCACGCGCGGGGGACCCGTGTGCAGGT
6 CCGGGGCCCGCAAGGCGACATGCCAACGGGCTTACACCCAATCTCCGCTGCTGTCCGCCA
7 ACACACGGTATTCCCCGGCGCGCCAGCCACGGGCTCTGGAGAACACCCATGACGGGGCGC
8 CCCGGCGCCCCCCCACGGAGAGGTACCGCCGCGGGAGCTCAGGGGGGCAGTTCTGGCCCT
9 ACGGAGGGCGGCTGTAGCCCGCCCTCTGCCCGAGCGGAGTCTCGGGGGCGGCGGGGACCT
10 CCGGATGCGTCTCTGAGGAGGTCTCGCGCCGCGTAGTTTGGTCTCAGCGCGACTGCGCCC
11 GGGCGGAGTACAAGAGGGCGGGAGGGGTCGGGCCCCGCGTCGCGGAGCGGCGGGGCGGTG
12 CCGGCCGGTTGGGTGGCCGCTGGGGCAGGCTCGCCGGGGGGATCGGGGCAAGACGACTGG
13 ACGAAACCCGCTACAGGCGCAAGCTGCCCGCCGGCGAGGAGCTCCCACTACGGGGTGTTT
14 CGGGCCTCGGGGACTGCACGAGGGCCGTGTGGTGGACGAGCAACGCAGGCCCGGCCGGCC
15 GCGCGC
16 >ERR550641
17 TTATAACCATTTAAATAATTAGTAAGGATACTTTATTTACTTTATTCCAGATTGTGTAAC
18 TATGGAATGCATTCTTTTTGGCCGCTCGAAGGGTTGAGGTATACCCATGAAAGTGTGGAA
19 AACATTCTGAATTATATTAATTAGTATTGCCGTTAGTCTTCTCTACATTAGCGACTCGAT
20 GAACTTGAAGCGCGAGTTGACTTGGAGGAAGTAGTGACTAGATAAACTTTATCGATCTGC
21 ATATAAGGTGGGCCTTAGTGGCTTGCAAAATCCGTCTAAGGCAGTGTACATCTCATGAGG
22 GTCTGAAACAGTGTTGAAACTTGTCGCTGGAACTGTCCAGTGGCCTTGTCAGTTACATAG
23 TGAGATATCGTTAATTACGACAAGCTTCTTAACAAGATGTTCAGATAGGACCTGACTTCG
24 GGACGATTTGATGACGAATCATTTGTCTTTAAGATATCCGTCTATAAAAACTAAAACTTG
25 TTAAGGACACTGACACCAGAAGTTAAAATTATAGGAGCCAACTGAGCTCTACGCCTATGA
26 TAATTACGCGTGCACAAATAAACAACCCGAAATATTTTAGTAATAGAGAATACCAGACCA
27 TTTAAGACCCCATCATATAGCCAAATGGCTCAAATAAACGAGCTAAATTGCCGTGGATGA
28 CTAGGCGTTATGGAGAAGCGGCCTGATGTATTAAAACTTGATCTTTCTCCGAATACACCC
29 AAAAATGGCCAACTCCAGGCGATATTACAGCTCCCGTCGAGCCAAACAAGTGACTTGATG
30 ACAGTT
31 >ERR550671
32 TTATAGCCATTTAAATAATTAGTAAGGATACTTTATTTACTTTATTCCAGATTGTGTGAC
33 TGTGGAATGCATTCTTTCTGGCCGCTCGAAGGGTTGAGGTATACCCATGAAAGTATGGAA
34 AACATTCTGAATTATATTAATTAGTATTGTCGTTAGTGTTCTCTACATTAGCGACTCGAT
35 GAACTTGAAGCGCGAGTTGACTTGGAGGAAGTAGTGACTAGATAGACTTTATCGATCTGC
36 CTATAAGGTAGACCTTAGTGGCTTGCAAAATCCGTCTACAGCAGTGTACATCTCATGAGG
37 GTCTGAAACATTGTTGAAACTTCTCGCTGGAACTGTCCAGTGGCCTTGTCAGTTACATAG
38 TGAAATATCGTTAATTACGACAAGCTTCTTAACAAGATGTTCAGATAGGACCTGACTTCG
39 GGACGATTTGATGACGAATTATTTGTCTTTAAGATGTCGGTCTATAAAAACTAAAAATTG
40 TTAAGGACACTGACACCAGAAGTTAAAACTATAGGAGCCAACTGAGCTCTACGCCTATGA
41 TAATTACGCGTGCACAAATAAACAACCCGAAATATTTTAGTAATAGAGAACACCACACCA
42 TTTAAGACCCCATCATATAGCCAAATGGCTCAAATAAACGAGCTAAATTGCCGTGGATGA
43 CTAGGCGTTATGGAGAAGCGGCCTGATCTATTAAAACTTAATCTTTCTCCGAATACACCC
44 AAAAATGGCCAACCCCAGGCGATATTACAGCTCCCGTCGAGCCAAACAAGTGACTTGATG
45 ACAGTT
46 >ERR550691
47 TTATAACCATTTAAATAATTAGTAAGGATACTTTATTTACTTTATTCCAGACTGTGTAAC
48 TATGGAATGCATTCTTTTTGGCCCCCTTAAGGGTTGAGTTATATCCATAAAAGTGTGGAA
49 CACATTCTGAATTATATTAATTAGTATTACTATTAGTCTTCTCTACATTCGCGACTCGAT
50 GAAATTGAAGCGGGAGTTGACTTGGAGGAAGTAGTGACTAGATAAACTTTACCGATCTAC
51 ATATAAGGTGGGCCTTAGTGGCTTGCAAAATCCGTCTAAAGCAGTCGACATCTCATCAGG
52 GTCTGAAACCTGGTTGAAAGTTGTCTTTGGAACTGTCCAGTGGTCTTGTCAGTTACATAG
53 TGAGGTATTGTTAATTACGACAAGCTTCTTAACAAGATGTTCAAATAGGACCTGACTTAG
54 GGACGATTTAATGACGAATCATTTGTCTTTAAGATATCCGTCTATAAAAACTAAAACTTG
55 TTAAGGACACTGACACCAGAAGTCAAAATTATAGGAGCCAACTGAGCTCTACGCCTATGA
56 TAATTACACGTGCACAAATAAACAACCCGAAATATTTTAGTAATAGAGAATACCACACCA
57 TTTAAGACCCCATCATATAGCCAGATGACTCAAATAAACAAGCTAAATTGCCGTAGAAAA
58 CTAGGCGTTATGGAGAAGCGGCCTGATGTATTAAAACTTGATCTTTCTCCGAATACACCC
59 AAAAATGGCCAACTCCAGGCGATATTACAGCTCCCGTCGAGCCAAACAAGTGACTTAATG
60 ATAGTT
61 >ERR550703
62 TTATAACCATTTAAATAATTAGTAAGGATACTTTATTTACTTTATTCCAGATTGTGTAAC
63 TATGGAATGCATTCTTTTTGGCCGCTTGAAGGGTTGAGGTATATCCATGAAAGTGTGGAA
64 AACATTCTGAATTATATTAATTAGTATTGCTGTTAGTCTTCTCTACATTAGCGACTCGAT
65 GAACTTGAAGCGCGAGTTGACTTGGAGGAAGTAGTGACTAGATAGACTTTATCGATCTAC
66 ATATAAGGTGGGCCTTAGTGGCTTGCAAAATCCGTCTACAGCAGTGTACATCTCATGAGG
67 GTCTGAAACATTGTTGAAACTTGTCGTTGGAACTGTCCAGTGGCCTTGTCAGTTACATAG
68 TGAGATATCGTTAATTACGACAAGCTTCTTAACAAGATGTTCAGATAGGACCTGACTTCG
69 GGACGATTTGATGACGAATCATTTGTCTTTAAGATATCCGTCTATAAAAACTAAAACTTG
70 TTAAGGATACTGACACCAGAAGTTAAAACTATAGGAGCCAACTGAGCTCTACGCCTATGA
71 TAATTACGCGTGCACAAATAAACAACCCGAAATATTTTAGTAATAGAGAATACCAGACCA
72 TTTAAGACCCCATCATATAGCCAAATGGCTCAAATAAACAAGCTAAATTGCCGTGGAAGA
73 CTAGGCGTTATGGAGAAGCGGCCTGATGTATTAAAACTTGATCTTTCTCCGAATACACCC
74 AAAAATGGCCAACTCCAGGCGATATTACAGCTCCCGTCGAGCCAAACAAGTGACTTGATG
75 ACAGTT