Mercurial > repos > iuc > snpsift
view snpSift_macros.xml @ 4:b04635ebfab0 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpsift/snpsift commit 9d2052269bfbca81a5f9cd10c3153e611358a329
author | iuc |
---|---|
date | Tue, 24 Oct 2017 07:28:17 -0400 |
parents | 20c7d583fec1 |
children | 09d6806c609e |
line wrap: on
line source
<macros> <xml name="requirements"> <requirements> <requirement type="package" version="4.3.1p">snpsift</requirement> </requirements> </xml> <xml name="stdio"> <stdio> <exit_code range=":-1" level="fatal" description="Error: Cannot open file" /> <exit_code range="1:" level="fatal" description="Error" /> </stdio> </xml> <token name="@CONDA_SNPSIFT_JAR_PATH@">if [ -z "\$SNPSIFT_JAR_PATH" ]; then export SNPSIFT_JAR_PATH=\$(dirname \$(readlink -e \$(which SnpSift))); fi</token> <xml name="version_command"> <version_command><![CDATA[ SnpSift dbnsfp 2>&1|head -n 1 ]]></version_command> </xml> <token name="@WRAPPER_VERSION@">4.3</token> <token name="@EXTERNAL_DOCUMENTATION@"> For details about this tool, please go to: - http://snpeff.sourceforge.net/SnpEff_manual.html </token> <xml name="citations"> <citations> <citation type="doi">10.3389/fgene.2012.00035</citation> <yield /> </citations> </xml> </macros>