Mercurial > repos > iuc > spades_metaviralspades

comparison metaviralspades.xml @ 7:328aa71f0f3c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/spades commit 69c6e337e239e84ce8fec9cf9fb5d820136877b2
author iuc
date Tue, 23 Aug 2022 08:00:30 +0000
parents e060c3987513
children 5b26685e5d3b
comparison
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6:e060c3987513 7:328aa71f0f3c
125 <has_text_matching expression="#name&#009;length&#009;coverage"/> 125 <has_text_matching expression="#name&#009;length&#009;coverage"/>
126 <has_text_matching expression="NODE_1&#009;9645&#009;13.774865_cutoff_0_type_circular"/> 126 <has_text_matching expression="NODE_1&#009;9645&#009;13.774865_cutoff_0_type_circular"/>
127 </assert_contents> 127 </assert_contents>
128 </output> 128 </output>
129 <output_collection name="out_cr" type="list" count="3"> 129 <output_collection name="out_cr" type="list" count="3">
130 <element name="pl1.fq.gz.fastq.00.0_0.cor"> 130 <element name="pl1.fq.gz.fastq.00.0_0">
131 <assert_contents> 131 <assert_contents>
132 <has_size value="71752" delta="1000"/> 132 <has_size value="71752" delta="1000"/>
133 </assert_contents> 133 </assert_contents>
134 </element> 134 </element>
135 <element name="pl2.fq.gz.fastq.00.0_0.cor"> 135 <element name="pl2.fq.gz.fastq.00.0_0">
136 <assert_contents> 136 <assert_contents>
137 <has_size value="71752" delta="1000"/> 137 <has_size value="71752" delta="1000"/>
138 </assert_contents> 138 </assert_contents>
139 </element> 139 </element>
140 <element name="pl_unpaired.00.0_0.cor"> 140 <element name="pl_unpaired.00.0_0">
141 <assert_contents> 141 <assert_contents>
142 <has_size value="423" delta="100"/> 142 <has_size value="423" delta="100"/>
143 </assert_contents> 143 </assert_contents>
144 </element> 144 </element>
145 </output_collection> 145 </output_collection>
185 <param name="input2" value="pl2.fq.gz"/> 185 <param name="input2" value="pl2.fq.gz"/>
186 </conditional> 186 </conditional>
187 <param name="operation_mode" value="--only-error-correction"/> 187 <param name="operation_mode" value="--only-error-correction"/>
188 <param name="optional_output" value="cr,l"/> 188 <param name="optional_output" value="cr,l"/>
189 <output_collection name="out_cr" type="list" count="3"> 189 <output_collection name="out_cr" type="list" count="3">
190 <element name="pl1.fq.gz.fastq.00.0_0.cor"> 190 <element name="pl1.fq.gz.fastq.00.0_0">
191 <assert_contents> 191 <assert_contents>
192 <has_size value="71752" delta="1000"/> 192 <has_size value="71752" delta="1000"/>
193 </assert_contents> 193 </assert_contents>
194 </element> 194 </element>
195 <element name="pl2.fq.gz.fastq.00.0_0.cor"> 195 <element name="pl2.fq.gz.fastq.00.0_0">
196 <assert_contents> 196 <assert_contents>
197 <has_size value="71752" delta="1000"/> 197 <has_size value="71752" delta="1000"/>
198 </assert_contents> 198 </assert_contents>
199 </element> 199 </element>
200 <element name="pl_unpaired.00.0_0.cor"> 200 <element name="pl_unpaired.00.0_0">
201 <assert_contents> 201 <assert_contents>
202 <has_size value="423" delta="100"/> 202 <has_size value="423" delta="100"/>
203 </assert_contents> 203 </assert_contents>
204 </element> 204 </element>
205 </output_collection> 205 </output_collection>