Mercurial > repos > iuc > spaln
diff test-data/output1_gff_genes.gff3 @ 2:dd0cd2319ae5 draft
"planemo upload for repository https://github.com/ogotoh/spaln commit c06dea51e720899c3245d203c3a0abc9f179583f"
| author | iuc |
|---|---|
| date | Fri, 19 Nov 2021 10:09:15 +0000 |
| parents | 37b5e1f0b544 |
| children | 2e92e1929cb1 |
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--- a/test-data/output1_gff_genes.gff3 Thu Jul 16 07:57:10 2020 -0400 +++ b/test-data/output1_gff_genes.gff3 Fri Nov 19 10:09:15 2021 +0000 @@ -1,20 +1,20 @@ ##gff-version 3 ##sequence-region scaffold_1 1 59940 -scaffold_1 ALN gene 17 10418 627 + . ID=gene00001;Name=scaffold_1_5 -scaffold_1 ALN mRNA 17 10418 627 + . ID=mRNA00001;Parent=gene00001;Name=scaffold_1_5 -scaffold_1 ALN cds 17 62 79 + 0 ID=cds00001;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 1 14 + -scaffold_1 ALN cds 128 160 -4 + 2 ID=cds00002;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 15 27 + -scaffold_1 ALN cds 418 539 210 + 2 ID=cds00003;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 28 68 + -scaffold_1 ALN cds 7124 7250 187 + 0 ID=cds00004;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 69 110 + -scaffold_1 ALN cds 7563 7595 11 + 2 ID=cds00005;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 111 121 + +scaffold_1 ALN gene 17 10418 420 + . ID=gene00001;Name=scaffold_1_5 +scaffold_1 ALN mRNA 17 10418 420 + . ID=mRNA00001;Parent=gene00001;Name=scaffold_1_5 +scaffold_1 ALN cds 17 62 71 + 0 ID=cds00001;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 1 15 + +scaffold_1 ALN cds 305 334 5 + 2 ID=cds00002;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 16 27 + +scaffold_1 ALN cds 418 539 207 + 2 ID=cds00003;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 28 68 + +scaffold_1 ALN cds 7124 7250 186 + 0 ID=cds00004;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 69 110 + +scaffold_1 ALN cds 7563 7595 10 + 2 ID=cds00005;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 111 121 + scaffold_1 ALN cds 7659 7662 21 + 2 ID=cds00006;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 122 123 + scaffold_1 ALN cds 7738 7864 21 + 1 ID=cds00007;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 124 165 + -scaffold_1 ALN cds 7925 7957 26 + 0 ID=cds00008;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 166 176 + +scaffold_1 ALN cds 7925 7957 25 + 0 ID=cds00008;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 166 176 + scaffold_1 ALN cds 8295 8300 29 + 0 ID=cds00009;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 177 178 + -scaffold_1 ALN cds 8866 8883 31 + 0 ID=cds00010;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 179 184 + +scaffold_1 ALN cds 8866 8883 30 + 0 ID=cds00010;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 179 184 + scaffold_1 ALN cds 8980 8994 30 + 0 ID=cds00011;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 185 189 + -scaffold_1 ALN cds 9067 9077 27 + 0 ID=cds00012;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 190 193 + +scaffold_1 ALN cds 9067 9077 26 + 0 ID=cds00012;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 190 193 + scaffold_1 ALN cds 9976 9988 28 + 1 ID=cds00013;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 194 197 + scaffold_1 ALN cds 10045 10068 27 + 0 ID=cds00014;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 198 205 + scaffold_1 ALN cds 10229 10252 38 + 0 ID=cds00015;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 206 213 + -scaffold_1 ALN cds 10395 10418 23 + 0 ID=cds00016;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 214 222 + +scaffold_1 ALN cds 10395 10418 46 + 0 ID=cds00016;Parent=mRNA00001;Name=scaffold_1_5;Target=NP_001121846.1 214 222 +