Mercurial > repos > iuc > split_libraries_fastq

comparison test-data/split_libraries/split_library_log @ 0:6f55444df744 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
author iuc
date Thu, 18 May 2017 09:37:08 -0400
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-1:000000000000 0:6f55444df744
1 Number raw input seqs 8
2
3 Length outside bounds of 200 and 1000 0
4 Num ambiguous bases exceeds limit of 6 0
5 Missing Qual Score 0
6 Mean qual score below minimum of 25 0
7 Max homopolymer run exceeds limit of 6 0
8 Num mismatches in primer exceeds limit of 0: 0
9
10 Sequence length details for all sequences passing quality filters:
11 Raw len min/max/avg 244.0/276.0/255.5
12 Wrote len min/max/avg 211.0/243.0/222.5
13
14 Barcodes corrected/not 0/0
15 Uncorrected barcodes will not be written to the output fasta file.
16 Corrected barcodes will be written with the appropriate barcode category.
17 Corrected but unassigned sequences will not be written unless --retain_unassigned_reads is enabled.
18
19 Total valid barcodes that are not in mapping file 0
20 Sequences associated with valid barcodes that are not in the mapping file will not be written.
21
22 Barcodes in mapping file
23 Num Samples 3
24 Sample ct min/max/mean: 2 / 4 / 2.67
25 Sample Sequence Count Barcode
26 PC.634 4 ACAGAGTCGGCT
27 PC.354 2 AGCACGAGCCTA
28 PC.481 2 ACCAGCGACTAG
29 PC.593 0 AGCAGCACTTGT
30 PC.636 0 ACGGTGAGTGTC
31 PC.635 0 ACCGCAGAGTCA
32 PC.356 0 ACAGACCACTCA
33 PC.607 0 AACTGTGCGTAC
34 PC.355 0 AACTCGTCGATG
35
36 Total number seqs written 8