comparison run_tests.sh @ 0:76733d05d8ef draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/spyboat commit 5c60a414c785246371beac23ce52d8bbab3602d1"
author iuc
date Sat, 28 Nov 2020 13:45:34 +0000
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-1:000000000000 0:76733d05d8ef
1 #!/usr/bin/env bash
2
3
4 INPUT_PATH='./test-data/test-movie.tif'
5 SCRIPT_PATH='.'
6
7 # set to galaxy defaults!!
8 python3 $SCRIPT_PATH/spyboat_cli.py --input_path $INPUT_PATH --phase_out phase_out.tif --period_out period_out.tif --dt 1 --Tmin 20 --Tmax 30 --nT 150 --ncpu 6 --Tcutoff 40
9
10 # additional paramters
11 #--masking static --mask_frame 10 --mask_thresh 300 --rescale 80 --gauss_sigma 1
12
13 printf "\n"
14 # printf "\nError examples:\n"
15