view test-data/output1.html @ 4:8815bc7e9cef draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/spyboat commit 9b86d7ef6ea6b25984c276df2ea3ff960aa76460
author iuc
date Mon, 10 Oct 2022 17:02:00 +0000
parents 639d2031d998
children
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    <html>
    <!-- this file got automatically created by 'output_report.py' -->
    <title>SpyBOAT Output Report</title>
    <head>
        <!-- that doesn't work with galaxy.. -->
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    </head>
    <body>
    <h1 style="text-align:center; color:#363333">SpyBOAT Results Report</h1>
    <hr style="width:70%">

    <h1 class="subheader"> Spatial Summary Statistics </h1>
    <div class="div_distr">
      <img src="period_distr.png" alt="Period"
       class="centerimg">
      <p> Median and quartiles of the estimated periods for each frame </p>
    </div>


    <div class="div_distr">
      <img src="power_distr.png" alt="Period"
       class="centerimg">
      <p> Median and quartiles of the ridge wavelet power for each frame </p>
    </div>
    <div class="div_distr">
      <img src="phase_distr.png" alt="Period"
       class="centerimg">
      <p> Kuramoto order parameter for the phases estimated for each frame </p>

    </div>

    <h1 class="subheader"> Output Movie Snapshots </h1>

    <!-- trigger the javascript at the end--->
    <div class="center">
        <button class="w3-button" onclick="plusDivs(-1)">&#10094; Prev</button>
        <button class="w3-button" onclick="plusDivs(1)">Next &#10095;</button>
    </div>

    <!-- defines all elements of the "FrameSlides" class --->
    
        <div class="FrameSlides">
        <h3 style="text-align:center; color=#363333">
        Frame Nr. 20 </h3>

            <div class="snapshot_gallery">

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--1" style="margin: 0 0">
                 <img src="input_frame20.png" alt="The Input"
                     class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                  snapshot_gallery__item--2" style="margin: 0 0">
                 <img src="phase_frame20.png" alt="Phase"
                    class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                    snapshot_gallery__item--3" style="margin: 0 0">
                 <img src="period_frame20.png"
                   alt="Period" class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--4" style="margin: 0 0">
                 <img src="amplitude_frame20.png"
                   alt="Amplitude" class="snapshot_gallery__img">
               </figure>
            </div>
        </div>
        
        <div class="FrameSlides">
        <h3 style="text-align:center; color=#363333">
        Frame Nr. 27 </h3>

            <div class="snapshot_gallery">

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--1" style="margin: 0 0">
                 <img src="input_frame27.png" alt="The Input"
                     class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                  snapshot_gallery__item--2" style="margin: 0 0">
                 <img src="phase_frame27.png" alt="Phase"
                    class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                    snapshot_gallery__item--3" style="margin: 0 0">
                 <img src="period_frame27.png"
                   alt="Period" class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--4" style="margin: 0 0">
                 <img src="amplitude_frame27.png"
                   alt="Amplitude" class="snapshot_gallery__img">
               </figure>
            </div>
        </div>
        
        <div class="FrameSlides">
        <h3 style="text-align:center; color=#363333">
        Frame Nr. 34 </h3>

            <div class="snapshot_gallery">

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--1" style="margin: 0 0">
                 <img src="input_frame34.png" alt="The Input"
                     class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                  snapshot_gallery__item--2" style="margin: 0 0">
                 <img src="phase_frame34.png" alt="Phase"
                    class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                    snapshot_gallery__item--3" style="margin: 0 0">
                 <img src="period_frame34.png"
                   alt="Period" class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--4" style="margin: 0 0">
                 <img src="amplitude_frame34.png"
                   alt="Amplitude" class="snapshot_gallery__img">
               </figure>
            </div>
        </div>
        
        <div class="FrameSlides">
        <h3 style="text-align:center; color=#363333">
        Frame Nr. 41 </h3>

            <div class="snapshot_gallery">

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--1" style="margin: 0 0">
                 <img src="input_frame41.png" alt="The Input"
                     class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                  snapshot_gallery__item--2" style="margin: 0 0">
                 <img src="phase_frame41.png" alt="Phase"
                    class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                    snapshot_gallery__item--3" style="margin: 0 0">
                 <img src="period_frame41.png"
                   alt="Period" class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--4" style="margin: 0 0">
                 <img src="amplitude_frame41.png"
                   alt="Amplitude" class="snapshot_gallery__img">
               </figure>
            </div>
        </div>
        
        <div class="FrameSlides">
        <h3 style="text-align:center; color=#363333">
        Frame Nr. 48 </h3>

            <div class="snapshot_gallery">

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--1" style="margin: 0 0">
                 <img src="input_frame48.png" alt="The Input"
                     class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                  snapshot_gallery__item--2" style="margin: 0 0">
                 <img src="phase_frame48.png" alt="Phase"
                    class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                    snapshot_gallery__item--3" style="margin: 0 0">
                 <img src="period_frame48.png"
                   alt="Period" class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--4" style="margin: 0 0">
                 <img src="amplitude_frame48.png"
                   alt="Amplitude" class="snapshot_gallery__img">
               </figure>
            </div>
        </div>
        
        <div class="FrameSlides">
        <h3 style="text-align:center; color=#363333">
        Frame Nr. 55 </h3>

            <div class="snapshot_gallery">

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--1" style="margin: 0 0">
                 <img src="input_frame55.png" alt="The Input"
                     class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                  snapshot_gallery__item--2" style="margin: 0 0">
                 <img src="phase_frame55.png" alt="Phase"
                    class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                    snapshot_gallery__item--3" style="margin: 0 0">
                 <img src="period_frame55.png"
                   alt="Period" class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--4" style="margin: 0 0">
                 <img src="amplitude_frame55.png"
                   alt="Amplitude" class="snapshot_gallery__img">
               </figure>
            </div>
        </div>
        
        <div class="FrameSlides">
        <h3 style="text-align:center; color=#363333">
        Frame Nr. 62 </h3>

            <div class="snapshot_gallery">

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--1" style="margin: 0 0">
                 <img src="input_frame62.png" alt="The Input"
                     class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                  snapshot_gallery__item--2" style="margin: 0 0">
                 <img src="phase_frame62.png" alt="Phase"
                    class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                    snapshot_gallery__item--3" style="margin: 0 0">
                 <img src="period_frame62.png"
                   alt="Period" class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--4" style="margin: 0 0">
                 <img src="amplitude_frame62.png"
                   alt="Amplitude" class="snapshot_gallery__img">
               </figure>
            </div>
        </div>
        
        <div class="FrameSlides">
        <h3 style="text-align:center; color=#363333">
        Frame Nr. 69 </h3>

            <div class="snapshot_gallery">

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--1" style="margin: 0 0">
                 <img src="input_frame69.png" alt="The Input"
                     class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                  snapshot_gallery__item--2" style="margin: 0 0">
                 <img src="phase_frame69.png" alt="Phase"
                    class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                    snapshot_gallery__item--3" style="margin: 0 0">
                 <img src="period_frame69.png"
                   alt="Period" class="snapshot_gallery__img">
               </figure>

               <figure class=”snapshot_gallery__item
                   snapshot_gallery__item--4" style="margin: 0 0">
                 <img src="amplitude_frame69.png"
                   alt="Amplitude" class="snapshot_gallery__img">
               </figure>
            </div>
        </div>
        
    </div>

    <h1 class="subheader"> Parameters </h1>
    <div class="div_distr">
      <table border = "1" class="partable">
         <tr>
            <th>Name</th>
            <th>Value</th>
         </tr>
         
            <tr>
              <td>ncpu </td>
              <td> 1</td>
            </tr>
            <tr>
              <td>rescale_factor </td>
              <td> None</td>
            </tr>
            <tr>
              <td>gauss_sigma </td>
              <td> None</td>
            </tr>
            <tr>
              <td>dt </td>
              <td> 1.0</td>
            </tr>
            <tr>
              <td>Tmin </td>
              <td> 20.0</td>
            </tr>
            <tr>
              <td>Tmax </td>
              <td> 30.0</td>
            </tr>
            <tr>
              <td>nT </td>
              <td> 150</td>
            </tr>
            <tr>
              <td>Tcutoff </td>
              <td> 40.0</td>
            </tr>
            <tr>
              <td>win_size </td>
              <td> None</td>
            </tr>
            <tr>
              <td>masking </td>
              <td> None</td>
            </tr>
            <tr>
              <td>mask_frame </td>
              <td> None</td>
            </tr>
            <tr>
              <td>mask_thresh </td>
              <td> 0</td>
            </tr>
      </table>
    </div>

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