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comparison macros.xml @ 33:6591f049cf7e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit 09541df3d3341a9ca442161117fa0e577d0d0bd5
author iuc
date Wed, 25 Oct 2023 20:02:46 +0000
parents fb723c531be5
children e407b9da183a
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32:fb723c531be5 33:6591f049cf7e
114 </macro> 114 </macro>
115 <macro name="minMapq"> 115 <macro name="minMapq">
116 <param name="minMapq" type="integer" min="0" max="42" label="Minimum mapping quality" optional="true" help="Minimum mapping quality an alignment has to have, to be dumped." argument="--min-mapq"/> 116 <param name="minMapq" type="integer" min="0" max="42" label="Minimum mapping quality" optional="true" help="Minimum mapping quality an alignment has to have, to be dumped." argument="--min-mapq"/>
117 </macro> 117 </macro>
118 <macro name="region"> 118 <macro name="region">
119 <param format="text" name="region" type="text" label="aligned region" optional="true" 119 <param name="region" type="text" label="aligned region" optional="true"
120 help="Filter by position on genome. Can be either accession.version (ex: NC_000001.10), chromosome name (ex:chr1 or 1) or 1-based coordinates (ex: chr1:1-101)." argument="--aligned-region"/> 120 help="Filter by position on genome. Can be either accession.version (ex: NC_000001.10), chromosome name (ex:chr1 or 1) or 1-based coordinates (ex: chr1:1-101)." argument="--aligned-region"/>
121 </macro> 121 </macro>
122 <macro name="matepairDist"> 122 <macro name="matepairDist">
123 <param name="matepairDist" type="text" label="mate-pair distance (from-to|unknown)" optional="true" 123 <param name="matepairDist" type="text" label="mate-pair distance (from-to|unknown)" optional="true"
124 help="Filter by distance between matepairs. Use unknown to find matepairs split between the references. Use from-to (inclusive) to limit matepair distance on the same reference" argument="--matepair-distance"/> 124 help="Filter by distance between matepairs. Use unknown to find matepairs split between the references. Use from-to (inclusive) to limit matepair distance on the same reference" argument="--matepair-distance"/>