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comparison macros.xml @ 35:de0f7e0a3896 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit 982e95f710991fe45c44900c80ef00efa0740b9a
author iuc
date Thu, 07 Mar 2024 07:22:00 +0000
parents e407b9da183a
children ba931a59dd59
comparison
equal deleted inserted replaced
34:e407b9da183a 35:de0f7e0a3896
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">3.0.8</token> 2 <token name="@TOOL_VERSION@">3.0.10</token>
3 <token name="@VERSION_SUFFIX@">1</token> 3 <token name="@VERSION_SUFFIX@">0</token>
4 <token name="@PROFILE@">22.01</token> 4 <token name="@PROFILE@">22.01</token>
5 <xml name="edam_ontology"> 5 <xml name="edam_ontology">
6 <edam_topics> 6 <edam_topics>
7 <edam_topic>topic_0622</edam_topic> <!-- Genomics --> 7 <edam_topic>topic_0622</edam_topic> <!-- Genomics -->
8 <edam_topic>topic_0091</edam_topic> <!-- Bioinformatics --> 8 <edam_topic>topic_0091</edam_topic> <!-- Bioinformatics -->
14 </xml> 14 </xml>
15 <macro name="requirements"> 15 <macro name="requirements">
16 <requirements> 16 <requirements>
17 <requirement type="package" version="@TOOL_VERSION@">sra-tools</requirement> 17 <requirement type="package" version="@TOOL_VERSION@">sra-tools</requirement>
18 <requirement type="package" version="2.8">pigz</requirement> 18 <requirement type="package" version="2.8">pigz</requirement>
19 <requirement type="package" version="1.18">samtools</requirement> 19 <requirement type="package" version="1.19.2">samtools</requirement>
20 <yield/> 20 <yield/>
21 </requirements> 21 </requirements>
22 </macro> 22 </macro>
23 <token name="@ACCESSIONS_FROM_FILE@"> 23 <token name="@ACCESSIONS_FROM_FILE@">
24 grep '^[[:space:]]*[E|S|D]RR[0-9]\{1,\}[[:space:]]*$' 24 grep '^[[:space:]]*[E|S|D]RR[0-9]\{1,\}[[:space:]]*$'