Mercurial > repos > iuc > sra_tools
comparison sra_macros.xml @ 15:f5ea3ce9b9b0 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit fe3f54a0d3edb83fcf6752e3b1524c582b4febd5"
author | iuc |
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date | Tue, 10 Sep 2019 11:35:35 -0400 |
parents | 1790dcf3c32d |
children | aad3885b3216 |
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14:1790dcf3c32d | 15:f5ea3ce9b9b0 |
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1 <macros> | 1 <macros> |
2 <token name="@VERSION@">2.9.1</token> | 2 <token name="@VERSION@">2.10</token> |
3 <token name="@ACCESSIONS_FROM_FILE@"> | 3 <token name="@ACCESSIONS_FROM_FILE@"> |
4 grep '^[[:space:]]*[E|S|D]RR[0-9]\{1,\}[[:space:]]*$' | 4 grep '^[[:space:]]*[E|S|D]RR[0-9]\{1,\}[[:space:]]*$' |
5 </token> | 5 </token> |
6 <token name="@SET_ACCESSIONS@"><![CDATA[ | 6 <token name="@SET_ACCESSIONS@"><![CDATA[ |
7 #if $input.input_select=="file_list": | 7 #if $input.input_select=="file_list": |
12 #end if | 12 #end if |
13 ]]></token> | 13 ]]></token> |
14 | 14 |
15 <macro name="requirements"> | 15 <macro name="requirements"> |
16 <requirements> | 16 <requirements> |
17 <requirement type="package" version="2.9.1">sra-tools</requirement> | 17 <requirement type="package" version="2.10">sra-tools</requirement> |
18 <requirement type="package" version="1.9">samtools</requirement> | 18 <requirement type="package" version="1.9">samtools</requirement> |
19 </requirements> | 19 </requirements> |
20 </macro> | 20 </macro> |
21 <macro name="sanitize_query"> | 21 <macro name="sanitize_query"> |
22 <sanitizer> | 22 <sanitizer> |