# HG changeset patch
# User iuc
# Date 1477038739 14400
# Node ID 62e4d56ebb6f4b409540288e465ab4b8d6db06bb
# Parent  4732693f46611f073ce2d6cc3c3aa1120e028cae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit 4091428e9e28ca06263bc00cdf938d20f620aa4d

diff -r 4732693f4661 -r 62e4d56ebb6f fastq_dump.xml
--- a/fastq_dump.xml	Tue Oct 18 14:54:40 2016 -0400
+++ b/fastq_dump.xml	Fri Oct 21 04:32:19 2016 -0400
@@ -4,11 +4,8 @@
         <import>sra_macros.xml</import>
     </macros>
     <expand macro="requirements"/>
-    <stdio>
-        <exit_code range="127" level="fatal" description="Could not locate fastq-dump binary"/>
-    </stdio>
     <version_command>fastq-dump --version</version_command>
-    <command>
+    <command detect_errors="exit_code">
         <![CDATA[
 
     #if $input.input_select=="file_list":
diff -r 4732693f4661 -r 62e4d56ebb6f sam_dump.xml
--- a/sam_dump.xml	Tue Oct 18 14:54:40 2016 -0400
+++ b/sam_dump.xml	Fri Oct 21 04:32:19 2016 -0400
@@ -5,7 +5,7 @@
     </macros>
     <expand macro="requirements"/>
     <version_command>sam-dump --version</version_command>
-    <command>
+    <command detect_errors="exit_code">
         <![CDATA[
     #if $input.input_select=="file_list":
       for acc in `cat $input.file_list` ;
diff -r 4732693f4661 -r 62e4d56ebb6f sra_macros.xml
--- a/sra_macros.xml	Tue Oct 18 14:54:40 2016 -0400
+++ b/sra_macros.xml	Fri Oct 21 04:32:19 2016 -0400
@@ -1,5 +1,5 @@
 <macros>
-    <token name="@VERSION@">2.7.0</token>
+    <token name="@VERSION@">2.7.0.1</token>
     <macro name="requirements">
         <requirements>
             <requirement type="package" version="2.7.0">sra-tools</requirement>
diff -r 4732693f4661 -r 62e4d56ebb6f sra_pileup.xml
--- a/sra_pileup.xml	Tue Oct 18 14:54:40 2016 -0400
+++ b/sra_pileup.xml	Fri Oct 21 04:32:19 2016 -0400
@@ -5,7 +5,7 @@
     </macros>
     <expand macro="requirements"/>
     <version_command>sra-pileup --version</version_command>
-    <command>
+    <command detect_errors="exit_code">
         <![CDATA[
         ## Need to set the home directory to the current working directory,
         ## else the tool tries to write to home/.ncbi and fails when used