Mercurial > repos > iuc > stacks2_gstacks

comparison test-data/populations/populations.log.distribs @ 0:d35cb34f2b85 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit b395fa36fa826e26085820ba3a9faacaeddcb460
author iuc
date Mon, 01 Jul 2019 10:59:14 -0400
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-1:000000000000 0:d35cb34f2b85
1 # Note: Individual distributions can be extracted using the `stacks-dist-extract` utility.
2 # e.g. `stacks-dist-extract populations.log.distribs dist_name`
3
4 BEGIN batch_progress
5 Batch 1: analyzed 3 loci; filtered 0 loci; 3 loci seen.
6 END batch_progress
7
8 BEGIN samples_per_loc_prefilters
9 # Distribution of valid samples matched to a catalog locus prior to filtering.
10 n_samples n_loci
11 2 3
12 END samples_per_loc_prefilters
13
14 BEGIN missing_samples_per_loc_prefilters
15 # Distribution of missing samples for each catalog locus prior to filtering.
16 # Absent samples at locus Count
17 0 3
18 END missing_samples_per_loc_prefilters
19
20 BEGIN snps_per_loc_prefilters
21 # Distribution of the number of SNPs per catalog locus prior to filtering.
22 n_snps n_loci
23 2 3
24 END snps_per_loc_prefilters
25
26 BEGIN samples_per_loc_postfilters
27 # Distribution of valid samples matched to a catalog locus after filtering.
28 n_samples n_loci
29 2 3
30 END samples_per_loc_postfilters
31
32 BEGIN missing_samples_per_loc_postfilters
33 # Distribution of missing samples for each catalog locus after filtering.
34 # Absent samples at locus Count
35 0 3
36 END missing_samples_per_loc_postfilters
37
38 BEGIN snps_per_loc_postfilters
39 # Distribution of the number of SNPs per catalog locus (after filtering).
40 n_snps n_loci
41 2 3
42 END snps_per_loc_postfilters