Mercurial > repos > iuc > stacks2_gstacks
diff test-data/kmerfilter/kfreqdist.tsv @ 2:1d839ead7ad3 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit f55e2407891a3c1f73f14a77b7ddadcd6f5eb1f8"
author | iuc |
---|---|
date | Wed, 15 Jul 2020 17:24:38 -0400 |
parents | d35cb34f2b85 |
children |
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--- a/test-data/kmerfilter/kfreqdist.tsv Mon Sep 30 14:19:17 2019 -0400 +++ b/test-data/kmerfilter/kfreqdist.tsv Wed Jul 15 17:24:38 2020 -0400 @@ -1,3 +1,545 @@ -# KmerFrequency Count -1 408 -2 136 +# Kmer Count +TAAGAGCATCGAGGG 1 +CTCAGTTAAGAGCAT 1 +ACTCAGTTAAGAGCA 1 +CCACTCAGTTAAGAG 1 +GCCACTCAGTTAAGA 1 +GGCCACTCAGTTAAG 1 +GGGCCACTCAGTTAA 1 +CCGCGGGCCACTCAG 1 +CCCGCGGGCCACTCA 1 +CCCCGCGGGCCACTC 1 +TTCGGACCCCGCGGG 1 +GCTTCGGACCCCGCG 1 +CGCTTCGGACCCCGC 1 +AACGCTTCGGACCCC 1 +GTAAACGCTTCGGAC 1 +AGTAAACGCTTCGGA 1 +AAGTAAACGCTTCGG 1 +AAAGTAAACGCTTCG 1 +CAAAGTAAACGCTTC 1 +TCAAAGTAAACGCTT 1 +TTTTCAAAGTAAACG 1 +TTTTTTCAAAGTAAA 1 +ATTTTTTCAAAGTAA 1 +CTAATTTTTTCAAAG 1 +CACTCTAATTTTTTC 1 +AACACTCTAATTTTT 1 +GAACACTCTAATTTT 1 +CTTTGAACACTCTAA 1 +GCTTTGAACACTCTA 1 +TGCTTTGAACACTCT 1 +CTGCTTTGAACACTC 1 +TAAACGCTTCGGACC 1 +CCTGCTTTGAACACT 1 +GCCTGCTTTGAACAC 1 +GGGCCTGCTTTGAAC 1 +ACCGGGCCTGCTTTG 1 +GACCGGGCCTGCTTT 1 +ATTCAGGCGACCGGG 1 +TATTCAGGCGACCGG 1 +GTATTCAGGCGACCG 1 +CGGTATTCAGGCGAC 1 +ACACTCTAATTTTTT 1 +GCGGTATTCAGGCGA 1 +TGCGGTATTCAGGCG 1 +CTGCGGTATTCAGGC 1 +TAGCTGCGGTATTCA 1 +CTAGCTGCGGTATTC 1 +CCTAGCTGCGGTATT 1 +TCCTAGCTGCGGTAT 1 +TTCCTAGCTGCGGTA 1 +CATTATTCCTAGCTG 1 +CCATTATTCCTAGCT 1 +ATTCCATTATTCCTA 1 +TCCTATTCCATTATT 1 +GTCCTATTCCATTAT 1 +GAGTCCTATTCCATT 1 +GGAGTCCTATTCCAT 1 +AACCGGAGTCCTATT 1 +GGACCCCGCGGGCCA 1 +GAACCGGAGTCCTAT 1 +AATAGAACCGGAGTC 1 +AAATAGAACCGGAGT 1 +AAAATAGAACCGGAG 1 +ACAAAATAGAACCGG 1 +CCACAAAATAGAACC 1 +ACCCACAAAATAGAA 1 +AACCCACAAAATAGA 1 +AAACCCACAAAATAG 1 +AAAACCCACAAAATA 1 +AAAAACCCACAAAAT 1 +GAAAAACCCACAAAA 1 +TTAAGAGCATCGAGG 1 +AGAAAAACCCACAAA 1 +AAGAAAAACCCACAA 1 +TGTTATAGCAGCAAA 1 +GTACTCTGACCCTGG 2 +GGTCGACATACTTTT 1 +AGCAAAGGGGGGACC 1 +TAGAACCGGAGTCCT 1 +AGGCTGTTATAGCAG 1 +AGAACCGGAGTCCTA 1 +GAGGCTGTTATAGCA 1 +GGAGGCTGTTATAGC 1 +AGAAGAGTGGAGGCT 1 +CCAGAAGAGTGGAGG 1 +TTCCTCTGTCCCATT 2 +CCTTCCCAGAAGAGT 1 +GCAGCAAAGGGGGGA 1 +TTTTCGACCGAAACT 2 +TCTAACATCTAGTGG 1 +AGTGGAGGCTGTTAT 1 +AGTTGACACACACAA 2 +TCTAGTGGAAAGCCT 1 +CTGATTGAAACGCTA 1 +CAGTTAAGAGCATCG 1 +ACGCTATTAGCGCGC 1 +TTGACACACACAACA 2 +GAACCACTACTTCAA 1 +CACTCAGTTAAGAGC 1 +CTAACATCTAGTGGA 1 +GCTGCGGTATTCAGG 1 +GAGATGTTTGACGAG 1 +CGGAGTCCTATTCCA 1 +ACCGAAACTACACAT 2 +GAAGAGTGGAGGCTG 1 +AAGCCTTCCCAGAAG 1 +AACCTCCGATCCGCA 2 +TGAGCAACCCTACAG 2 +ACGTTCTAACATCTA 1 +AACGTTCTAACATCT 1 +TATTCCTAGCTGCGG 1 +ATTATTCCTAGCTGC 1 +ATGTTTGACGAGCAG 1 +TCTCTCGCACCGGAA 2 +ATGAGATGTTTGACG 1 +GGCCTGCTTTGAACA 1 +AGCCTTCCCAGAAGA 1 +TTCCATTATTCCTAG 1 +CAACGTTCTAACATC 1 +ACTGATTGAAACGCT 1 +CTAGTGGAAAGCCTT 1 +TGAGATGTTTGACGA 1 +TCTGTCCCATTTCCT 2 +CCTCTGTCCCATTTC 2 +CATTCCTCTGTCCCA 2 +TTGAACACTCTAATT 1 +GAATGAGATGTTTGA 1 +ACACATTCCTCTGTC 2 +ATTCCTAGCTGCGGT 1 +CTCCATATTATTGCC 1 +GACCGAAACTACACA 2 +CGACCGAAACTACAC 2 +ACTACACATTCCTCT 2 +CTGCAGTACTCTGAC 2 +TTCTAACATCTAGTG 1 +CCGAAACTACACATT 2 +ATCCGTTACATATGT 1 +TACATATGTATGTAT 1 +CAGTACTCTGACCCT 2 +GTTCTAACATCTAGT 1 +ACAGTTTTCGACCGA 2 +TTGACGAGCAGGGGT 1 +CTCTGTCCCATTTCC 2 +CACAAAATAGAACCG 1 +TACTCTGACCCTGGC 2 +ATAGCAGCAAAGGGG 1 +TGAATGAGATGTTTG 1 +AACAGTTTTCGACCG 2 +TCGGACCCCGCGGGC 1 +ACCCTACAGTTGACA 2 +TCTCTCTCGCACCGG 2 +GTATGTATGTACACA 1 +ACACAACAGTTTTCG 2 +ACACACAACAGTTTT 2 +TCCCAGAAGAGTGGA 1 +ACCACCGCTAACTAG 1 +GAGTGGAGGCTGTTA 1 +ACACACACAACAGTT 2 +AACGCTATTAGCGCG 1 +GTAACTGATTGAAAC 1 +GTCTCTCTCGCACCG 2 +AACATCTAGTGGAAA 1 +CTTCCCAGAAGAGTG 1 +GTGGAAAGCCTTCCC 1 +CTACTTCAACTCAAG 1 +CGCGGGCCACTCAGT 1 +AACCTGTCTCTCTCG 2 +CTCGCACCGGAAACC 2 +CGCACCGGAAACCTC 2 +TATGTATGTACACAC 1 +ATCCATTTCACATCC 1 +ACTCTAATTTTTTCA 1 +GCTGCAGTACTCTGA 2 +ACATGAGCAACCCTA 2 +GACCCCGCGGGCCAC 1 +AAGAGTGGAGGCTGT 1 +CCGGAAACCTCCGAT 2 +GCAGCAACGTTCTAA 1 +GAAACTACACATTCC 2 +CTGACCCTGGCCACC 2 +ACCTCAACCTGTCTC 2 +AAACTACACATTCCT 2 +AGAGTGGAGGCTGTT 1 +GCGACCGGGCCTGCT 1 +CATCTAGTGGAAAGC 1 +CAGAAACATGAGCAA 2 +ACTTCAACTCAAGGT 1 +CGGGCCACTCAGTTA 1 +AGAAACATGAGCAAC 2 +CTATTCCATTATTCC 1 +TTTTGAATGAGATGT 1 +GGCGACCGGGCCTGC 1 +ACATCTAGTGGAAAG 1 +TAGCAGCAAAGGGGG 1 +GGACCAACTCCATAT 1 +GACATTGGCTGCAGT 2 +CCTATTCCATTATTC 1 +CAGTTTTCGACCGAA 2 +CAACCCTACAGTTGA 2 +TTTGACGAGCAGGGG 1 +GACGTAACTGATTGA 1 +CAGGCGACCGGGCCT 1 +ACTCTGACCCTGGCC 2 +CCGGGCCTGCTTTGA 1 +AGTGGAAAGCCTTCC 1 +TTGAAACGCTATTAG 1 +CGTTCTAACATCTAG 1 +TTGAGGATGCAGCAA 1 +CTCAAAGCGAGTGAC 1 +GGACATTGGCTGCAG 2 +ACCTGTCTCTCTCGC 2 +TTTGAACACTCTAAT 1 +TGACACACACAACAG 2 +CACATTCCTCTGTCC 2 +GTTTTCGACCGAAAC 2 +GCAGAAACATGAGCA 2 +CTGGCCACCTCAACC 2 +GATCCGCAGAAACAT 2 +TCCGATCCGCAGAAA 2 +AACCACTACTTCAAC 1 +GCTGTTATAGCAGCA 1 +AACTAGCTATCCATT 1 +CATGAGCAACCCTAC 2 +TCGACCGAAACTACA 2 +CCTACAGTTGACACA 2 +AAGGGGAACCACTAC 1 +AAAGCCTTCCCAGAA 1 +CACAACAGTTTTCGA 2 +GGAACCACTACTTCA 1 +CCTCAACCTGTCTCT 2 +AAACCTCCGATCCGC 2 +CTTCGGACCCCGCGG 1 +GGGGAACCACTACTT 1 +GGCTGCAGTACTCTG 2 +TTGGCTGCAGTACTC 2 +GAGCAAGGGGAACCA 1 +AGCAACGTTCTAACA 1 +TGCAGTACTCTGACC 2 +TGGCCACCTCAACCT 2 +GACTTTTGAATGAGA 1 +CAGAAGAAAAACCCA 1 +CACCTCAACCTGTCT 2 +CCGATCCGCAGAAAC 2 +GTTATAGCAGCAAAG 1 +TGGCTGCAGTACTCT 2 +CTGTCCCATTTCCTC 2 +AGATGTTTGACGAGC 1 +TACTTCAACTCAAGG 1 +AGCAGGGGTCGACAT 1 +CTTTTGAATGAGATG 1 +TCAACTCAAGGTCTC 1 +ACCGCTAACTAGCTA 1 +GCCACCTCAACCTGT 2 +TGACTTTTGAATGAG 1 +ACCACTACTTCAACT 1 +CCACCTCAACCTGTC 2 +CCATATTATTGCCCA 1 +CATTGGCTGCAGTAC 2 +CTCTAATTTTTTCAA 1 +ATCTAGTGGAAAGCC 1 +AGTACTCTGACCCTG 2 +TTCGACCGAAACTAC 2 +CGGAAACCTCCGATC 2 +AGCTATCCATTTCAC 1 +TGACCCTGGCCACCT 2 +CCGCGGCCCTTGCAG 1 +CTTCAACTCAAGGTC 1 +TTAGCGCGCACCACC 1 +GTGGAGGCTGTTATA 1 +CACCGGAAACCTCCG 2 +GATTGAGGATGCAGC 1 +AAACGCTTCGGACCC 1 +ACAGTTGACACACAC 2 +CGACCGGGCCTGCTT 1 +AGTCCTATTCCATTA 1 +AAGGTCTCAAAGCGA 1 +ACCCTGGCCACCTCA 2 +ACAACAGTTTTCGAC 2 +CTCTCTCGCACCGGA 2 +TGTCTCTCTCGCACC 2 +CAAAGCGAGTGACGT 1 +TTTTTCAAAGTAAAC 1 +TCTCGCACCGGAAAC 2 +GGCCACCTCAACCTG 2 +ATGCCGCGGCCCTTG 1 +TGTTTGACGAGCAGG 1 +CCCACAAAATAGAAC 1 +GAGGATGCAGCAACG 1 +AACCCTACAGTTGAC 2 +CCTGTCTCTCTCGCA 2 +TGCAGCAACGTTCTA 1 +AGCAAGGGGAACCAC 1 +TCTGACCCTGGCCAC 2 +GGCCCTTGCAGAGCA 1 +TAATTTTTTCAAAGT 1 +CTGTCTCTCTCGCAC 2 +ATAGAACCGGAGTCC 1 +GACCCTGGCCACCTC 2 +TGATTGAAACGCTAT 1 +GCGGGCCACTCAGTT 1 +TCAGAAGAAAAACCC 1 +TGGAGGCTGTTATAG 1 +AGCGCGCACCACCGC 1 +TCGCACCGGAAACCT 2 +TCAGTTAAGAGCATC 1 +ATTCCTCTGTCCCAT 2 +GACGAGCAGGGGTCG 1 +CCACTACTTCAACTC 1 +TCAACCTGTCTCTCT 2 +ACCGGAAACCTCCGA 2 +CCCTGGCCACCTCAA 2 +GAAACATGAGCAACC 2 +GCTAACTAGCTATCC 1 +AGTTTTCGACCGAAA 2 +CACACACAACAGTTT 2 +ATTTCACATCCGTTA 1 +TATTCCATTATTCCT 1 +CGATCCGCAGAAACA 2 +GGCTGTTATAGCAGC 1 +GGAAACCTCCGATCC 2 +GCAACGTTCTAACAT 1 +AGCAACCCTACAGTT 2 +TTATTCCTAGCTGCG 1 +CTCTGACCCTGGCCA 2 +CAGCAAAGGGGGGAC 1 +CAGAAGAGTGGAGGC 1 +TACAGTTGACACACA 2 +TAGCGCGCACCACCG 1 +AAACATGAGCAACCC 2 +AAACGCTATTAGCGC 1 +GAAACCTCCGATCCG 2 +GCCCATGACTTTTGA 1 +TCCATATTATTGCCC 1 +ACATTGGCTGCAGTA 2 +CAGTTGACACACACA 2 +TCAAGGTCTCAAAGC 1 +ATCCGCAGAAACATG 2 +CACACAACAGTTTTC 2 +GGATGCAGCAACGTT 1 +TTCAAAGTAAACGCT 1 +AACATGAGCAACCCT 2 +GAGTGACGTAACTGA 1 +CTGTTATAGCAGCAA 1 +TAACATCTAGTGGAA 1 +CTCTCGCACCGGAAA 2 +CGCAGAAACATGAGC 2 +GGATTGAGGATGCAG 1 +TCCTCTGTCCCATTT 2 +GGTATTCAGGCGACC 1 +ATGAGCAACCCTACA 2 +TGGAAAGCCTTCCCA 1 +AGGCGACCGGGCCTG 1 +ACCTCCGATCCGCAG 2 +TCCATTATTCCTAGC 1 +ACTACTTCAACTCAA 1 +GAGCAACCCTACAGT 2 +GCAACCCTACAGTTG 2 +AGCTGCGGTATTCAG 1 +ACTAGCTATCCATTT 1 +AGAAGAAAAACCCAC 1 +CCCTACAGTTGACAC 2 +CTACAGTTGACACAC 2 +CAAGGGGAACCACTA 1 +AGGATGCAGCAACGT 1 +TTATAGCAGCAAAGG 1 +GTTAAGAGCATCGAG 1 +TATAGCAGCAAAGGG 1 +GCAAAGGGGGGACCA 1 +CAAAGGGGGGACCAA 1 +ACCCCGCGGGCCACT 1 +GACCAACTCCATATT 1 +ACATATGTATGTATG 1 +AAGGGGGGACCAACT 1 +ACATTCCTCTGTCCC 2 +GCACCACCGCTAACT 1 +CCGCAGAAACATGAG 2 +AGGGGGGACCAACTC 1 +GGGGGGACCAACTCC 1 +GGGGGACCAACTCCA 1 +GCACCGGAAACCTCC 2 +GGGGACCAACTCCAT 1 +GCAGTACTCTGACCC 2 +ACCAACTCCATATTA 1 +CCAACTCCATATTAT 1 +ACATCCGTTACATAT 1 +TATTGCCCATGACTT 1 +CAACTCCATATTATT 1 +CTCAAGGTCTCAAAG 1 +CTATTAGCGCGCACC 1 +AACTCCATATTATTG 1 +ATTGAGGATGCAGCA 1 +CATATTATTGCCCAT 1 +GGGAACCACTACTTC 1 +ATATTATTGCCCATG 1 +TATTATTGCCCATGA 1 +TCTAATTTTTTCAAA 1 +TTTCGACCGAAACTA 2 +ATTATTGCCCATGAC 1 +ACTCCATATTATTGC 1 +CCGCTAACTAGCTAT 1 +TTATTGCCCATGACT 1 +CAACAGTTTTCGACC 2 +ATTGCCCATGACTTT 1 +TTGCCCATGACTTTT 1 +TGAGGATGCAGCAAC 1 +TGCCCATGACTTTTG 1 +CGCACCACCGCTAAC 1 +CCCATGACTTTTGAA 1 +TTCACATCCGTTACA 1 +CCATGACTTTTGAAT 1 +ATGACTTTTGAATGA 1 +ATGCAGCAACGTTCT 1 +GCGCACCACCGCTAA 1 +ACTTTTGAATGAGAT 1 +CATGACTTTTGAATG 1 +TTTGAATGAGATGTT 1 +AATTTTTTCAAAGTA 1 +ATGTATGTACACACA 1 +TCCGCAGAAACATGA 2 +TTGAATGAGATGTTT 1 +GATGTTTGACGAGCA 1 +TCACATCCGTTACAT 1 +ACGAGCAGGGGTCGA 1 +GAAGAAAAACCCACA 1 +CCCAGAAGAGTGGAG 1 +CGAGCAGGGGTCGAC 1 +GAGCAGGGGTCGACA 1 +GCAGAGCAAGGGGAA 1 +GTTGACACACACAAC 2 +GCAGGGGTCGACATA 1 +CGGACCCCGCGGGCC 1 +GATTGAAACGCTATT 1 +CAGGGGTCGACATAC 1 +ATTGAAACGCTATTA 1 +CAGCAACGTTCTAAC 1 +CAGAGCAAGGGGAAC 1 +AATGAGATGTTTGAC 1 +AGGGGTCGACATACT 1 +CTCCGATCCGCAGAA 2 +GGGGTCGACATACTT 1 +CAACCTGTCTCTCTC 2 +GGGTCGACATACTTT 1 +CAAAATAGAACCGGA 1 +TACACATTCCTCTGT 2 +AACTCAAGGTCTCAA 1 +TGCCGCGGCCCTTGC 1 +GCCGCGGCCCTTGCA 1 +CGCGGCCCTTGCAGA 1 +GCGGCCCTTGCAGAG 1 +CGGCCCTTGCAGAGC 1 +TTTCAAAGTAAACGC 1 +GCCTTCCCAGAAGAG 1 +TTTCACATCCGTTAC 1 +CCCTTGCAGAGCAAG 1 +CGGGCCTGCTTTGAA 1 +CTTGCAGAGCAAGGG 1 +TTGCAGAGCAAGGGG 1 +AAAGGGGGGACCAAC 1 +CCTTGCAGAGCAAGG 1 +TGCAGAGCAAGGGGA 1 +AGAGCAAGGGGAACC 1 +CCGGAGTCCTATTCC 1 +GCAAGGGGAACCACT 1 +TCCGTTACATATGTA 1 +AGGGGAACCACTACT 1 +CCTCCGATCCGCAGA 2 +CCTGGCCACCTCAAC 2 +CACTACTTCAACTCA 1 +TTCCCAGAAGAGTGG 1 +TTCAACTCAAGGTCT 1 +CAACTCAAGGTCTCA 1 +ACTCAAGGTCTCAAA 1 +GGTCTCAAAGCGAGT 1 +ACGCTTCGGACCCCG 1 +ATTGGCTGCAGTACT 2 +CAAGGTCTCAAAGCG 1 +GCTATCCATTTCACA 1 +GGGACCAACTCCATA 1 +TATCCATTTCACATC 1 +AACTACACATTCCTC 2 +AGGTCTCAAAGCGAG 1 +GATGCAGCAACGTTC 1 +GTCTCAAAGCGAGTG 1 +TGAACACTCTAATTT 1 +TGTATGTATGTACAC 1 +TCTCAAAGCGAGTGA 1 +TCAAAGCGAGTGACG 1 +AAGCGAGTGACGTAA 1 +CACCGCTAACTAGCT 1 +AGCGAGTGACGTAAC 1 +TTCAGGCGACCGGGC 1 +CACCACCGCTAACTA 1 +GCGAGTGACGTAACT 1 +AGTGACGTAACTGAT 1 +GTGACGTAACTGATT 1 +TATGTATGTATGTAC 1 +TGACGTAACTGATTG 1 +ACGTAACTGATTGAA 1 +CTCAACCTGTCTCTC 2 +CGTAACTGATTGAAA 1 +TAGTGGAAAGCCTTC 1 +TAACTGATTGAAACG 1 +GGAAAGCCTTCCCAG 1 +AACTGATTGAAACGC 1 +AGCAGCAAAGGGGGG 1 +TGAAACGCTATTAGC 1 +GAAACGCTATTAGCG 1 +CGCTATTAGCGCGCA 1 +GCTATTAGCGCGCAC 1 +AAAGCGAGTGACGTA 1 +TATTAGCGCGCACCA 1 +TCAGGCGACCGGGCC 1 +ATTAGCGCGCACCAC 1 +GCGCGCACCACCGCT 1 +ACCGGAGTCCTATTC 1 +CGCGCACCACCGCTA 1 +CCACCGCTAACTAGC 1 +GAAAGCCTTCCCAGA 1 +CGCTAACTAGCTATC 1 +CTAACTAGCTATCCA 1 +TAACTAGCTATCCAT 1 +GACACACACAACAGT 2 +CTAGCTATCCATTTC 1 +GCCCTTGCAGAGCAA 1 +TAGCTATCCATTTCA 1 +TGACGAGCAGGGGTC 1 +CTATCCATTTCACAT 1 +TCCATTTCACATCCG 1 +GTTTGACGAGCAGGG 1 +CATTTCACATCCGTT 1 +AGTTAAGAGCATCGA 1 +CACATCCGTTACATA 1 +ATGTATGTATGTACA 1 +CTACACATTCCTCTG 2 +CATCCGTTACATATG 1 +CCGTTACATATGTAT 1 +CGAGTGACGTAACTG 1 +CGTTACATATGTATG 1 +CCATTTCACATCCGT 1 +GTTACATATGTATGT 1 +TTACATATGTATGTA 1 +CGAAACTACACATTC 2 +CATATGTATGTATGT 1 +ATATGTATGTATGTA 1