Mercurial > repos > iuc > stacks2_refmap

annotate test-data/procrad/process_radtags_paired_no_barcode.out @ 7:adc7a7610d4f draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit feda4e2ea70c013fcddd1dbdeab73158fe9c86a4
author iuc
date Mon, 23 May 2022 17:46:17 +0000
parents 887e0991eb24
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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5
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
1 process_radtags -p stacks_inputs/ --paired -i gzfastq -y gzfasta -o stacks_outputs -e ecoRI
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
2 File Retained Reads Low Quality Barcode Not Found RAD cutsite Not Found Total
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
3 reads_R1_0.fastq.gz 7000 0 0 7000 14000
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
4
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
5 Total Sequences 14000
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
6 Barcode Not Found 0
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
7 Low Quality 0
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
8 RAD Cutsite Not Found 7000
887e0991eb24 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff changeset
9 Retained Reads 7000