Mercurial > repos > iuc > stacks2_refmap
annotate test-data/procrad/process_radtags_paired_no_barcode.out @ 7:adc7a7610d4f draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit feda4e2ea70c013fcddd1dbdeab73158fe9c86a4
author | iuc |
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date | Mon, 23 May 2022 17:46:17 +0000 |
parents | 887e0991eb24 |
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rev | line source |
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5
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
1 process_radtags -p stacks_inputs/ --paired -i gzfastq -y gzfasta -o stacks_outputs -e ecoRI |
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
2 File Retained Reads Low Quality Barcode Not Found RAD cutsite Not Found Total |
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
3 reads_R1_0.fastq.gz 7000 0 0 7000 14000 |
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
4 |
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
5 Total Sequences 14000 |
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
6 Barcode Not Found 0 |
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
7 Low Quality 0 |
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
8 RAD Cutsite Not Found 7000 |
887e0991eb24
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
iuc
parents:
diff
changeset
|
9 Retained Reads 7000 |