Mercurial > repos > iuc > stacks2_refmap
view test-data/tsv2bam/tsv2bam.log @ 1:319b10947ec1 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit c300b84615660459bb0020fa74ccd3b874d329a4"
author | iuc |
---|---|
date | Mon, 30 Sep 2019 14:15:21 -0400 |
parents | 45385ba40a75 |
children | 6dafad990086 |
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tsv2bam v2.4, executed 2019-06-17 21:22:16 (zlib-1.2.11) tsv2bam -P stacks_outputs -M denovo_map/popmap_cstacks.tsv -R demultiplexed/ Configuration for this run: Stacks directory: 'stacks_outputs/' Population map: 'denovo_map/popmap_cstacks.tsv' Num. samples: 2 Paired-end reads directory: 'demultiplexed/' Paired-end reads files found, e.g. 'demultiplexed/PopA_01.2.fq'. Loading the catalog... Processing sample 'PopA_01'... Processing sample 'PopA_02'... Sample 'PopA_01': matched 3 sample loci to 3 catalog loci; found a paired-end read for 66 (100.0%) of the assembled forward reads; wrote 132 records. Sample 'PopA_02': matched 3 sample loci to 3 catalog loci; found a paired-end read for 60 (100.0%) of the assembled forward reads; wrote 120 records. tsv2bam is done.