view test-data/populations/populations.log.distribs @ 4:d9bf483266a1 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 75f83e7b16127aecc68a58df2cb75062f2a9296a"
author iuc
date Wed, 01 Sep 2021 11:22:25 +0000
parents b7babdb3c219
children
line wrap: on
line source

# Note: Individual distributions can be extracted using the `stacks-dist-extract` utility.
#       e.g. `stacks-dist-extract populations.log.distribs dist_name`

BEGIN batch_progress
Batch 1: analyzed 3 loci; filtered 0 loci; 3 loci seen.
END batch_progress

BEGIN samples_per_loc_prefilters
# Distribution of valid samples matched to a catalog locus prior to filtering.
n_samples	n_loci
2	3
END samples_per_loc_prefilters

BEGIN missing_samples_per_loc_prefilters
# Distribution of missing samples for each catalog locus prior to filtering.
# Absent samples at locus	Count
0	3
END missing_samples_per_loc_prefilters

BEGIN snps_per_loc_prefilters
# Distribution of the number of SNPs per catalog locus prior to filtering.
n_snps	n_loci
2	3
END snps_per_loc_prefilters

BEGIN samples_per_loc_postfilters
# Distribution of valid samples matched to a catalog locus after filtering.
n_samples	n_loci
2	3
END samples_per_loc_postfilters

BEGIN missing_samples_per_loc_postfilters
# Distribution of missing samples for each catalog locus after filtering.
# Absent samples at locus	Count
0	3
END missing_samples_per_loc_postfilters

BEGIN snps_per_loc_postfilters
# Distribution of the number of SNPs per catalog locus (after filtering).
n_snps	n_loci
2	3
END snps_per_loc_postfilters