Mercurial > repos > iuc > stacks_assembleperead
view test-data/populations/batch_1.vcf @ 5:53fc2bd9d355 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 9401451df4a985ef5686864eaadafa077ffc0877
| author | iuc |
|---|---|
| date | Mon, 27 Feb 2017 05:43:16 -0500 |
| parents | ae705d244e28 |
| children |
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##fileformat=VCFv4.2 ##fileDate=20160926 ##source="Stacks v1.42" ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data"> ##INFO=<ID=AF,Number=.,Type=Float,Description="Allele Frequency"> ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> ##FORMAT=<ID=AD,Number=1,Type=Integer,Description="Allele Depth"> ##FORMAT=<ID=GL,Number=.,Type=Float,Description="Genotype Likelihood"> #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT PopA_01 PopA_02 un 35 1_33 A C . PASS NS=2;AF=0.500 GT:DP:AD:GL 0/1:18:9,9:.,19.78,. 0/1:10:6,4:.,13.18,. un 90 1_88 A C . PASS NS=2;AF=0.500 GT:DP:AD:GL 0/1:18:9,9:.,19.78,. 0/1:10:4,6:.,13.18,.