Mercurial > repos > iuc > stacks_genotypes
diff stacks_genotypes.xml @ 10:00f4a4e553ae draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 689ccfe1532a4de7b60fe69cd3945601d76aefb6"
| author | iuc |
|---|---|
| date | Thu, 26 Sep 2019 10:22:20 -0400 |
| parents | 8dc6a3afbe83 |
| children | 46f061f3cfeb |
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--- a/stacks_genotypes.xml Sun May 21 18:53:07 2017 -0400 +++ b/stacks_genotypes.xml Thu Sep 26 10:22:20 2019 -0400 @@ -117,8 +117,8 @@ <param name="mindepth" type="integer" value="" optional="true" argument="-m" label="Minimum stack depth required before exporting a locus in a particular individual" /> <param name="lnl" type="float" value="" optional="true" argument="--lnl_lim" label="Filter loci with log likelihood values below this threshold" /> - <param name="whitelist" argument="-W" format="txt,tabular" type="data" optional="true" label="Specify a file containing Whitelisted markers to include in the export" /> - <param name="blacklist" argument="-B" format="txt,tabular" type="data" optional="true" label="Specify a file containing Blacklisted markers to be excluded from the export" /> + <param name="whitelist" argument="-W" format="txt,tabular" type="data" optional="true" label="Specify a file containing markers to include in the export" /> + <param name="blacklist" argument="-B" format="txt,tabular" type="data" optional="true" label="Specify a file containing markers to exclude from the export" /> <param name="manual_cor" argument="--cor_path" type="data" format="tabular,txt" optional="true" label="Path to file containing manual genotype corrections from a Stacks SQL database to incorporate into output." />