Mercurial > repos > iuc > stacks_sstacks

comparison test-data/populations/batch_1.vcf @ 4:679f97ac0dd5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 643293a896a2ccfac10fe995f48c7f01c1a89a7f
author iuc
date Mon, 26 Sep 2016 11:45:36 -0400
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3:344cfdb7dd48 4:679f97ac0dd5
1 ##fileformat=VCFv4.2
2 ##fileDate=20160926
3 ##source="Stacks v1.42"
4 ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data">
5 ##INFO=<ID=AF,Number=.,Type=Float,Description="Allele Frequency">
6 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
7 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
8 ##FORMAT=<ID=AD,Number=1,Type=Integer,Description="Allele Depth">
9 ##FORMAT=<ID=GL,Number=.,Type=Float,Description="Genotype Likelihood">
10 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT PopA_01 PopA_02
11 un 35 1_33 A C . PASS NS=2;AF=0.500 GT:DP:AD:GL 0/1:18:9,9:.,19.78,. 0/1:10:6,4:.,13.18,.
12 un 90 1_88 A C . PASS NS=2;AF=0.500 GT:DP:AD:GL 0/1:18:9,9:.,19.78,. 0/1:10:4,6:.,13.18,.