Mercurial > repos > iuc > straindesign_analyzing_model

comparison analyzing-model.xml @ 1:3b09226992ff draft default tip

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planemo upload for repository https://github.com/brsynth/straindesign commit 64ebfca7e5fd855b5d887974e39040c125193626
author iuc
date Mon, 20 Feb 2023 10:01:24 +0000
parents 490a37e24bed
children
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0:490a37e24bed 1:3b09226992ff
45 <param name="model" ftype="sbml" value="iAF1260.xml.gz"/> 45 <param name="model" ftype="sbml" value="iAF1260.xml.gz"/>
46 <param name="biomass_rxn_id" value="BIOMASS_Ec_iAF1260_core_59p81M" /> 46 <param name="biomass_rxn_id" value="BIOMASS_Ec_iAF1260_core_59p81M" />
47 <param name="target_rxn_id" value="EX_tyrp_e" /> 47 <param name="target_rxn_id" value="EX_tyrp_e" />
48 <output name="output_png" ftype="png"> 48 <output name="output_png" ftype="png">
49 <assert_contents> 49 <assert_contents>
50 <has_size value="34000" delta="4000"/> 50 <has_size value="30000" delta="10000"/>
51 </assert_contents> 51 </assert_contents>
52 </output> 52 </output>
53 </test> 53 </test>
54 <test> 54 <test>
55 <!-- test 2 --> 55 <!-- test 2 -->
57 <param name="biomass_rxn_id" value="BIOMASS_Ec_iAF1260_core_59p81M" /> 57 <param name="biomass_rxn_id" value="BIOMASS_Ec_iAF1260_core_59p81M" />
58 <param name="target_rxn_id" value="EX_tyrp_e" /> 58 <param name="target_rxn_id" value="EX_tyrp_e" />
59 <param name="substrate_rxn_id" value="EX_glc__D_e" /> 59 <param name="substrate_rxn_id" value="EX_glc__D_e" />
60 <output name="output_png" ftype="png"> 60 <output name="output_png" ftype="png">
61 <assert_contents> 61 <assert_contents>
62 <has_size value="34000" delta="4000"/> 62 <has_size value="30000" delta="10000"/>
63 </assert_contents> 63 </assert_contents>
64 </output> 64 </output>
65 </test> 65 </test>
66 <test> 66 <test>
67 <!-- test 3 --> 67 <!-- test 3 -->
71 <param name="biomass_rxn_id" value="BIOMASS_Ec_iAF1260_core_59p81M" /> 71 <param name="biomass_rxn_id" value="BIOMASS_Ec_iAF1260_core_59p81M" />
72 <param name="substrate_rxn_id" value="EX_glc__D_e" /> 72 <param name="substrate_rxn_id" value="EX_glc__D_e" />
73 <param name="target_rxn_id" value="EX_1btol_e" /> 73 <param name="target_rxn_id" value="EX_1btol_e" />
74 <output name="output_png" ftype="png"> 74 <output name="output_png" ftype="png">
75 <assert_contents> 75 <assert_contents>
76 <has_size value="34000" delta="4000"/> 76 <has_size value="30000" delta="10000"/>
77 </assert_contents> 77 </assert_contents>
78 </output> 78 </output>
79 </test> 79 </test>
80 </tests> 80 </tests>
81 <help><![CDATA[ 81 <help><![CDATA[