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comparison stringtie_merge.xml @ 15:dd4df992d93d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit a834a41c94d184df80e45ffa2339723826a075b1
author iuc
date Tue, 24 Jul 2018 10:23:37 -0400
parents 6e45b443ef1f
children 258d696dbd7e
comparison
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14:eafd5dc95228 15:dd4df992d93d
1 <tool id="stringtie_merge" name="StringTie merge" version="1.3.3"> 1 <tool id="stringtie_merge" name="StringTie merge" version="@TOOL_VERSION@">
2 <description>transcripts</description> 2 <description>transcripts</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
38 </outputs> 38 </outputs>
39 <tests> 39 <tests>
40 <test> 40 <test>
41 <param name="input_gtf" ftype="gtf" value="stringtie_out1.gtf,stringtie_out2.gtf,stringtie_out3.gtf,stringtie_out4.gtf" /> 41 <param name="input_gtf" ftype="gtf" value="stringtie_out1.gtf,stringtie_out2.gtf,stringtie_out3.gtf,stringtie_out4.gtf" />
42 <param name="guide_gff" ftype="gtf" value="stringtie_in.gtf" /> 42 <param name="guide_gff" ftype="gtf" value="stringtie_in.gtf" />
43 <output name="out_gtf" file="stringtie_merge_out1.gtf" ftype="gtf" lines_diff="2" /> 43 <output name="out_gtf" file="stringtie_merge_out1.gtf" ftype="gtf" lines_diff="4" />
44 </test> 44 </test>
45 <test> 45 <test>
46 <param name="input_gtf" ftype="gtf" value="stringtie_merge_in1.gtf,stringtie_merge_in2.gtf" /> 46 <param name="input_gtf" ftype="gtf" value="stringtie_merge_in1.gtf,stringtie_merge_in2.gtf" />
47 <param name="guide_gff" ftype="gtf" value="stringtie_merge_in3.gtf" /> 47 <param name="guide_gff" ftype="gtf" value="stringtie_merge_in3.gtf" />
48 <output name="out_gtf" file="stringtie_merge_out2.gtf" ftype="gtf" lines_diff="2" /> 48 <output name="out_gtf" file="stringtie_merge_out2.gtf" ftype="gtf" lines_diff="4" />
49 </test> 49 </test>
50 <test> 50 <test>
51 <param name="input_gtf" ftype="gtf" value="stringtie_merge_in1.gtf,stringtie_merge_in2.gtf" /> 51 <param name="input_gtf" ftype="gtf" value="stringtie_merge_in1.gtf,stringtie_merge_in2.gtf" />
52 <output name="out_gtf" ftype="gtf"> 52 <output name="out_gtf" ftype="gtf">
53 <assert_contents> 53 <assert_contents>