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comparison test-data/stringtie_merge_out2.gtf @ 24:cbf488da3b2c draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 8dc7b89b32a9e86c48e9ef7078703ae277bdaf96
author iuc
date Mon, 13 May 2024 14:07:55 +0000
parents 8eb8750070d4
children
comparison
equal deleted inserted replaced
23:8eb8750070d4 24:cbf488da3b2c
1 # stringtie --merge -p 1 -G /tmp/tmpr8yl388j/files/9/2/b/dataset_92bbbdee-6cfa-4cff-bab3-0d0836475341.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpr8yl388j/job_working_directory/000/10/outputs/dataset_81bd1351-3b74-4332-b789-a4f53357a8fa.dat /tmp/tmpr8yl388j/files/3/c/3/dataset_3c3b1fdc-0351-48ef-a6eb-6c226751f619.dat /tmp/tmpr8yl388j/files/2/a/4/dataset_2a44d87f-131b-4587-bf25-2527d7d89964.dat 1 # stringtie --merge -p 1 -G /tmp/tmpapg328z2/files/e/5/c/dataset_e5cafc26-99e9-441e-b6d7-6732d4e8ff0c.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpapg328z2/job_working_directory/000/10/outputs/dataset_c4d4110e-aa10-4a05-9ce8-bd76d91507a8.dat /tmp/tmpapg328z2/files/1/0/b/dataset_10b29ded-6b7b-45d4-8138-0ee6ebcbe3be.dat /tmp/tmpapg328z2/files/0/e/f/dataset_0efcd212-8978-444b-b29a-8818bb24f977.dat
2 # StringTie version 2.2.2 2 # StringTie version 2.2.3
3 chr1 StringTie transcript 3189811 3193042 1000 . . gene_id "MSTRG.1"; transcript_id "MSTRG.1.1"; 3 chr1 StringTie transcript 3189811 3193042 1000 . . gene_id "MSTRG.1"; transcript_id "MSTRG.1.1";
4 chr1 StringTie exon 3189811 3193042 1000 . . gene_id "MSTRG.1"; transcript_id "MSTRG.1.1"; exon_number "1"; 4 chr1 StringTie exon 3189811 3193042 1000 . . gene_id "MSTRG.1"; transcript_id "MSTRG.1.1"; exon_number "1";
5 chr1 StringTie transcript 3200023 3200191 1000 . . gene_id "MSTRG.2"; transcript_id "MSTRG.2.1"; 5 chr1 StringTie transcript 3200023 3200191 1000 . . gene_id "MSTRG.2"; transcript_id "MSTRG.2.1";
6 chr1 StringTie exon 3200023 3200191 1000 . . gene_id "MSTRG.2"; transcript_id "MSTRG.2.1"; exon_number "1"; 6 chr1 StringTie exon 3200023 3200191 1000 . . gene_id "MSTRG.2"; transcript_id "MSTRG.2.1"; exon_number "1";
7 chr1 StringTie transcript 3201078 3201809 1000 . . gene_id "MSTRG.3"; transcript_id "MSTRG.3.1"; 7 chr1 StringTie transcript 3201078 3201809 1000 . . gene_id "MSTRG.3"; transcript_id "MSTRG.3.1";