Mercurial > repos > iuc > stringtie
diff test-data/stringtie_merge_out1.gtf @ 21:914cfcba0ec8 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 8923485156dc1150213ad1f324aa16aaef4ae643
| author | iuc |
|---|---|
| date | Mon, 31 Oct 2022 20:08:02 +0000 |
| parents | cef79931dda5 |
| children | 8eb8750070d4 |
line wrap: on
line diff
--- a/test-data/stringtie_merge_out1.gtf Wed Jul 27 09:28:15 2022 +0000 +++ b/test-data/stringtie_merge_out1.gtf Mon Oct 31 20:08:02 2022 +0000 @@ -1,4 +1,4 @@ -# StringTie version 2\.1\.7 +# StringTie version 2\.2\.1 # stringtie --merge -p [0-9]+ -G /[-_/a-zA-Z0-9]+\.dat -m 50 -c 0 -F 1\.0 -T 1\.0 -f 0\.01 -g 250 -o /[-_/a-zA-Z0-9]+\.dat /[-_/a-zA-Z0-9]+\.dat /[-_/a-zA-Z0-9]+\.dat /[-_/a-zA-Z0-9]+\.dat /[-_/a-zA-Z0-9]+\.dat test_chromosome\tStringTie\texon\t351\t400\t1000\t\+\t\.\tgene_id "MSTRG\.[0-9]+"; transcript_id "CUFF\.[0-9]+\.1"; exon_number "[0-9]+"; ref_gene_id "CUFF\.[0-9]+"; test_chromosome\tStringTie\texon\t501\t550\t1000\t\+\t\.\tgene_id "MSTRG\.[0-9]+"; transcript_id "CUFF\.[0-9]+\.1"; exon_number "[0-9]+"; ref_gene_id "CUFF\.[0-9]+";