Mercurial > repos > iuc > stringtie
diff test-data/stringtie_merge_out1.gtf @ 24:cbf488da3b2c draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 8dc7b89b32a9e86c48e9ef7078703ae277bdaf96
| author | iuc |
|---|---|
| date | Mon, 13 May 2024 14:07:55 +0000 |
| parents | 8eb8750070d4 |
| children |
line wrap: on
line diff
--- a/test-data/stringtie_merge_out1.gtf Tue Apr 30 11:53:08 2024 +0000 +++ b/test-data/stringtie_merge_out1.gtf Mon May 13 14:07:55 2024 +0000 @@ -1,5 +1,5 @@ -# stringtie --merge -p 1 -G /tmp/tmpr8yl388j/files/d/8/3/dataset_d8325888-f757-4336-9e42-1101c6ec296d.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpr8yl388j/job_working_directory/000/6/outputs/dataset_51c0f399-1d26-44c7-a4fd-e6f8897fe843.dat /tmp/tmpr8yl388j/files/5/5/b/dataset_55be25a6-c7f0-474e-a011-bb4cd427cfa2.dat /tmp/tmpr8yl388j/files/b/2/e/dataset_b2ef2a9d-3640-4858-8424-b4a29c57164d.dat /tmp/tmpr8yl388j/files/d/9/b/dataset_d9be016a-da47-4ad1-89bd-e9781f2751db.dat /tmp/tmpr8yl388j/files/b/e/f/dataset_befee6d4-95fb-4ee9-83a4-9b1302e6a21a.dat -# StringTie version 2.2.2 +# stringtie --merge -p 1 -G /tmp/tmpapg328z2/files/2/f/f/dataset_2ff25b99-2996-4dec-83a0-d6c51a43761b.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpapg328z2/job_working_directory/000/6/outputs/dataset_edbe5c52-579b-47c1-b320-ba0bc8412b28.dat /tmp/tmpapg328z2/files/8/8/b/dataset_88be1713-81b3-46bd-ba7f-fa6cc8afca2d.dat /tmp/tmpapg328z2/files/b/c/d/dataset_bcd50081-e47a-48e9-ad3b-772cb04956b4.dat /tmp/tmpapg328z2/files/4/f/b/dataset_4fbad666-bf26-4724-92da-1b19fe88ba76.dat /tmp/tmpapg328z2/files/1/e/a/dataset_1ea206fb-8397-4b1d-9930-3341d6597970.dat +# StringTie version 2.2.3 test_chromosome StringTie transcript 53 550 1000 + . gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; ref_gene_id "CUFF.1"; test_chromosome StringTie exon 53 250 1000 + . gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; exon_number "1"; ref_gene_id "CUFF.1"; test_chromosome StringTie exon 351 400 1000 + . gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; exon_number "2"; ref_gene_id "CUFF.1";