Mercurial > repos > iuc > stringtie
diff test-data/stringtie_out1_re.gtf @ 24:cbf488da3b2c draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 8dc7b89b32a9e86c48e9ef7078703ae277bdaf96
| author | iuc |
|---|---|
| date | Mon, 13 May 2024 14:07:55 +0000 |
| parents | 8eb8750070d4 |
| children |
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--- a/test-data/stringtie_out1_re.gtf Tue Apr 30 11:53:08 2024 +0000 +++ b/test-data/stringtie_out1_re.gtf Mon May 13 14:07:55 2024 +0000 @@ -1,5 +1,5 @@ -# stringtie /tmp/tmpm2qmdax_/files/7/c/4/dataset_7c4559ac-1803-4156-86aa-a965c40579dd.dat -o /tmp/tmpm2qmdax_/job_working_directory/000/2/outputs/dataset_628e00eb-c42b-4122-af6b-138d203e2288.dat -p 1 -f 0.01 -m 200 -a 10 -j 1 -c 1 -g 50 -M 1.0 -# StringTie version 2.2.2 +# stringtie /tmp/tmp0_r_zs0r/files/8/8/e/dataset_88e83131-016d-4ce3-b893-0f7de8d3af60.dat -o /tmp/tmp0_r_zs0r/job_working_directory/000/2/outputs/dataset_4eaceb01-9219-463e-bd84-48bb0abba00a.dat -p 1 -f 0.01 -m 200 -a 10 -j 1 -c 1 -g 50 -M 1.0 +# StringTie version 2.2.3 test_chromosome StringTie transcript 53 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "45.241611"; FPKM "3314403.750000"; TPM "1000000.000000"; test_chromosome StringTie exon 53 250 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "49.237373"; test_chromosome StringTie exon 351 400 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "53.000004";