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view test-data/stringtie_out3.gtf @ 15:dd4df992d93d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit a834a41c94d184df80e45ffa2339723826a075b1
author iuc
date Tue, 24 Jul 2018 10:23:37 -0400
parents c84d44519b2e
children eba36e001f45
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# stringtie /tmp/tmpJfKWNy/files/000/dataset_5.dat -o /tmp/tmpJfKWNy/files/000/dataset_7.dat -p 1 -C /tmp/tmpJfKWNy/files/000/dataset_8.dat -G /tmp/tmpJfKWNy/files/000/dataset_6.dat -b ./special_de_output/sample1/
# StringTie version 1.3.4d
test_chromosome	StringTie	transcript	53	550	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "44.070122"; FPKM "3228580.250000"; TPM "962398.937500";
test_chromosome	StringTie	exon	53	250	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "48.005386";
test_chromosome	StringTie	exon	351	400	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "51.452003";
test_chromosome	StringTie	exon	501	550	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "21.104616";