Mercurial > repos > iuc > suite_bcftools

changeset 13:76d2702d3bdc draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit c45135e52ae5039e09272ac6f504d0ceb574aa70
author iuc
date Sat, 23 Jul 2022 14:01:02 +0000
parents 4b8a84a65b62
children b6a4987dbff0
files repository_dependencies.xml
diffstat 1 files changed, 33 insertions(+), 32 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Tue Mar 08 18:13:30 2022 +0000
+++ b/repository_dependencies.xml	Sat Jul 23 14:01:02 2022 +0000
@@ -1,35 +1,36 @@
 <?xml version="1.0" ?>
 <repositories description="A suite of Galaxy tools designed to work with version 1.9 of the bcftools package.">
-    <repository owner="iuc" name="bcftools_concat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fc47ffec447e"/>
-    <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="de1764eb139f"/>
-    <repository owner="iuc" name="bcftools_query" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="94c5f302f0ea"/>
-    <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="64778f8899cc"/>
-    <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="cb1d846a29b8"/>
-    <repository owner="iuc" name="bcftools_filter" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e4988fd4d503"/>
-    <repository owner="iuc" name="bcftools_reheader" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="6993b945aefc"/>
-    <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3828c11c88b0"/>
-    <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f35cc95efb32"/>
-    <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8d5d8355559b"/>
-    <repository owner="iuc" name="bcftools_cnv" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8d637025a905"/>
-    <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="58341ad4fb42"/>
-    <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="99238dfb46cb"/>
-    <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="41873b29860a"/>
-    <repository owner="iuc" name="bcftools_annotate" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2958e3b49ad4"/>
-    <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="32a039e689d6"/>
-    <repository owner="iuc" name="bcftools_call" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d267bcfdc8fe"/>
-    <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="34585fd4bd3e"/>
-    <repository owner="iuc" name="bcftools_isec" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="4afd849c9d35"/>
-    <repository owner="iuc" name="bcftools_stats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="80844da35ed5"/>
-    <repository owner="iuc" name="bcftools_consensus" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="edc3d484b99a"/>
-    <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="57c0f25c6fcb"/>
-    <repository owner="iuc" name="bcftools_mpileup" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="6d7dc9a1bef3"/>
-    <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="bbc9a1e89ca6"/>
-    <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="4e85a3a5dbd1"/>
-    <repository owner="iuc" name="bcftools_csq" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="68216882a410"/>
-    <repository owner="iuc" name="bcftools_view" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e1a2389af238"/>
-    <repository owner="iuc" name="bcftools_merge" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="798c063f8fc9"/>
-    <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ab8afa393997"/>
-    <repository owner="iuc" name="bcftools_norm" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="481476814acc"/>
-    <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="068e100f634a"/>
-    <repository owner="iuc" name="bcftools_roh" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fb3af223ff33"/>
+    <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="69d8b7567281"/>
+    <repository owner="iuc" name="bcftools_merge" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="86296490704e"/>
+    <repository owner="iuc" name="bcftools_consensus" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d37e313a41be"/>
+    <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="03e6fb76e969"/>
+    <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ba20340426fe"/>
+    <repository owner="iuc" name="bcftools_csq" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="64a8f7dae3ad"/>
+    <repository owner="iuc" name="bcftools_annotate" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e075b1be5abb"/>
+    <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5a321fab1fe4"/>
+    <repository owner="iuc" name="bcftools_cnv" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8627b2b383b4"/>
+    <repository owner="iuc" name="bcftools_roh" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="78cd8b69da4c"/>
+    <repository owner="iuc" name="bcftools_filter" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="33bd9301568c"/>
+    <repository owner="iuc" name="bcftools_mpileup" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f506df85c652"/>
+    <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="cbe39e530cbf"/>
+    <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="eccb508bb678"/>
+    <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="52f9e4a660e3"/>
+    <repository owner="iuc" name="bcftools_concat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="6b6c992d3a14"/>
+    <repository owner="iuc" name="bcftools_norm" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="021693fdadaa"/>
+    <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="de68c11034f6"/>
+    <repository owner="iuc" name="bcftools_view" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e15e4acae7ef"/>
+    <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2c4941386820"/>
+    <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3b6cd8086498"/>
+    <repository owner="iuc" name="bcftools_stats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e8af591435d1"/>
+    <repository owner="iuc" name="bcftools_reheader" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b7be725976b6"/>
+    <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9708e3086f32"/>
+    <repository owner="iuc" name="bcftools_isec" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="97d19c008d15"/>
+    <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="75ddd081f608"/>
+    <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="4ed46189d6c6"/>
+    <repository owner="iuc" name="bcftools_query" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f64e7ca2efd2"/>
+    <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7ef488b08a23"/>
+    <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8cb121b6a1d2"/>
+    <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="1137ce8efc1e"/>
+    <repository owner="iuc" name="bcftools_call" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c37b684e7f4e"/>
+    <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d52b8947b269"/>
 </repositories>
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