# HG changeset patch
# User iuc
# Date 1556275922 14400
# Node ID 06442031ea9eeace31f4f296b364a7d204173b0f
# Parent  bcb1eff1d72678cdd7df5530c400f0b2b858f2dd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 3e20977cfa8882c231128158827bbc85a770a371

diff -r bcb1eff1d726 -r 06442031ea9e repository_dependencies.xml
--- a/repository_dependencies.xml	Wed Oct 17 13:02:25 2018 -0400
+++ b/repository_dependencies.xml	Fri Apr 26 06:52:02 2019 -0400
@@ -1,14 +1,15 @@
-<?xml version="1.0"?>
-<repositories description="Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.">  <repository changeset_revision="34a018cbee9c" name="trinity_contig_exn50_statistic" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c9cfec002f71" name="trinity" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="478f36effca1" name="trinity_align_and_estimate_abundance" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fab23c3b5258" name="trinity_analyze_diff_expr" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="37a1129c89d2" name="trinity_gene_to_trans_map" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0693ccd171c4" name="describe_samples" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d6a479fd4281" name="trinity_abundance_estimates_to_matrix" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e406ac71165d" name="trinity_filter_low_expr_transcripts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3abd51c4b151" name="trinity_super_transcripts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="33406f5a445c" name="trinity_define_clusters_by_cutting_tree" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1d689e4e1caf" name="trinity_run_de_analysis" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9871104ea630" name="trinity_samples_qccheck" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-</repositories>
+<?xml version="1.0" ?>
+<repositories description="Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.">
+    <repository changeset_revision="34a018cbee9c" name="trinity_contig_exn50_statistic" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="c9cfec002f71" name="trinity" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="478f36effca1" name="trinity_align_and_estimate_abundance" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="dc0f01791c9b" name="trinity_analyze_diff_expr" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="37a1129c89d2" name="trinity_gene_to_trans_map" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="0693ccd171c4" name="describe_samples" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="d6a479fd4281" name="trinity_abundance_estimates_to_matrix" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="e406ac71165d" name="trinity_filter_low_expr_transcripts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="3abd51c4b151" name="trinity_super_transcripts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="6fa08f46db8c" name="trinity_define_clusters_by_cutting_tree" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="1d689e4e1caf" name="trinity_run_de_analysis" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="9871104ea630" name="trinity_samples_qccheck" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+</repositories>
\ No newline at end of file