Mercurial > repos > iuc > taxonomy_filter_refseq
view test-data/sample_refseq.fasta @ 1:d9662c76b6d5 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc commit e68b434ae52d29f038bac26874ceb51d4911b4fb"
author | iuc |
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date | Wed, 29 Apr 2020 16:50:22 -0400 |
parents | 28e95c6a944d |
children |
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>YP_009026408.1 Coat Protein [Arhar cryptic virus-II] MNQGDRVPPHADTPSAPVETPPPIQGPTTNDLSRATEFLVKSTRLCWLQTNHEKYRSYVTLNRNELYSTLVELYTHFFAS EWTTLRRYVEPYTTETIAHQQRFAARNYISGWFIDLYVSNREAVKKLTPLAYNEYYSTDKARHHPEYDNFLTLLSSAIRP THIMDTPEDTLYIPLIRRQRQLGTENNPFNITDFVYSYPFVCGLIQTLQARKCWKRSPLSDNTMGRATWLFDWHGDKMVA PFPATGNYTKDDVTMAYILGVPCTPLIGCVDVDDWQFIPPNVDINTVNPNTLVRIDDPRFPGAYSVRVIETQEEYYLPIS SEGAMEIASRLGRPQRPSKKRKTASASTSKDPTTPASSTMVEYSDDPVDFNAPGSVSKIIVITDYLFCR >YP_009137150.1 neurovirulence protein ICP34.5 [Human alphaherpesvirus 2] MSRRRGPRRRGPRRRPRPGAPAVPRPGAPAVPRPGALPTADSQMVPAYDSGTAVESAPAASSLLRRWLLVPQADDSDDAD YAGNDDAEWANSPPSEGGGKAPEAPHAAPAAACPPPPPRKERGPQRPLPPHLALRLRTTTEYLARLSLRRRRPPASPPAD APRGKVCFSPRVQVRHLVAWETAARLARRGSWARERADRDRFRRRVAAAEAVIGPCLEPEARARARARARAHEDGGPAEE EEAAAAARGSSAAAGPGRRAV >YP_009137151.1 ubiquitin E3 ligase ICP0 [Human alphaherpesvirus 2] MEPRPGTSSRADPGPERPPRQTPGTQPAAPHAWGMLNDMQWLASSDSEEETEVGISDDDLHRDSTSEAGSTDTEMFEAGL MDAATPPARPPAERQGSPTPADAQGSCGGGPVGEEEAEAGGGGDVCAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWIPLR NTCPLCNTPVAYLIVGVTASGSFSTIPIVNDPRTRVEAEAAVRAGTAVDFIWTGNQRTAPRSLSLGGHTVRALSPTPPWP GTDDEDDDLADVDYVPPAPRRAPRRGGGGAGATRGTSQPAATRPAPPGAPRSSSSGGAPLRAGVGSGSGGGPAVAAVVPR VASLPPAAGGGRAQARRVGEDAAAAEGRTPPAGQPRAAQEPPIVISDSPPPSPRRPAGPGPLSFFSSSSAQVSSGPGGGG LPQSSGRAARPRAAVAPRVRSPPRAAAAPVVSASADAAGPAPPAVPVDAHRAPRSRMTQAQTDTQAQSLGRAGATDARGS GGPGAEGGPGVPRGTNTPGAAPHAAEGAAARPRKRRGSDSGPAASSSASSSAAPRSPLAPQGVGAKRAAPRRAPDSDSGD RGHGPLAPASAGAAPPSASPSSQAAVAAAASSSSSAASSSSSAASSSSSAASSSSSAASSSSAASSSSSSSSASSSAGGA GGSVASASGAGERRETSLGPRAAAPRGPRKCARKTRHAEGGPEPGARDPAPGLTRYLPIAGVSSVVALAPYVNKTVTGDC LPVLDMETGHIGAYVVLVDQTGNVADLLRAAAPAWSRRTLLPEHARNCVRPPDYPTPPASEWNSLWMTPVGNMLFDQGTL VGALDFHGLRSRHPWSREQGAPAPAGDAPAGHGE >YP_009137152.1 envelope glycoprotein L [Human alphaherpesvirus 2] MGFVCLFGLVVMGAWGAWGGSQATEYVLRSVIAKEVGDILRVPCMRTPADDVSWRYEAPSVIDYARIDGIFLRYHCPGLD TFLWDRHAQRAYLVNPFLFAAGFLEDLSHSVFPADTQETTTRRALYKEIRDALGSRKQAVSHAPVRAGCVNFDYSRTRRC VGRRDLRPANTTSTWEPPVSSDDEASSQSKPLATQPPVLALSNAPPRRVSPTRGRRRHTRLRRN >YP_009173773.1 putative ATP-dependent DNA helicase [Mycoplasma phage phiMFV1] MNKMPWESEEVEYKKSTSELKEAIISLTAMLNKKGTGTVYFGVKDDRTVVGLEIGNKTMRDISQAISNNVKPEIMPRISI EFIDNQNVIKVEAEGEQKPYSAYDKYYIRIGEEDKKLNRDKLVDFVQKSVSKINICEIENKDQDLTFNSFLLYANIKNLT VNKDTFEKNFDLKTKNNKYNLMSYLLADNNDISIKVNTFKDNDKSVLLKRNEYGNKCLFYAIESVLNYVGSINDTYVDLS TATRSEQKLFNFECFREAWLNACIHNRWDEKYPPQVNIFKDYIQIESNGGIPRNMTKEKFFKGVSRPVNEKLQKIFMQLD LVEQTGHGVPLIVKKYGEEAFEIDENTIWVKIPFNRKGFKRINEKENKNNLNDNQIKVIKTIEKESNITINQLSSTLSLS EGYIKKIINQLKNKNLIERNGLRKNGNWTIISYNL >YP_044791.1 RepB [Mycoplasma phage phiMFV1] MLLTTKQLQEFYKIEMENIAKNKSLLTNFNIIDNYANGLKPKQLYFLAARPGVGKTSFALNIIFNALENLKEDECIVLFS LEMDSIEIYSKLLALANSCSLKEVETNSKKIDFEDLNKKNLFIFDRYRNNFNNEKLSEVTPDIIYKSLNSIGLKIKAVFI DYFQLLDNQKYSSEREKLSQCSKQLKELSKIFNCNFFVLSQLSREYEKKTNNEPSFSDLKGTGSIEQDADLIMFLYNSSN NFNVGTLIPNKKTILNLSIAKNRNGELVKTNIDFIPHLAKFIES >YP_044792.1 hypothetical protein [Mycoplasma phage phiMFV1] MLNNKCDFCHKRFQPKKERYFWGNLVVCSEECLEQVSCYASEIDLNCEGENNE >YP_044793.1 hypothetical protein [Mycoplasma phage phiMFV1] MNKEKLIKFLIDLTEKENTKLKSDVKILKSKLKKIKKEYEEQEKAFDDLLKKL >YP_044794.1 hypothetical protein [Mycoplasma phage phiMFV1] MDIFKKMEIAEKDKIEKLLLNIDKFIWDCNSKGWTKSKNKKVISLYKKTLEEIKKNEKYDWLYVPIKSQIYKFADHDLKS DIFLWFSHTKILCGYTYLKDKWNF >NP_044795.1 MarRP [Mycoplasma phage phiMFV1] MKFLKEPPVFTEEQFKELVHYTDLEDNPTFEAYKSNAFFKIYSGAKGVSKSFSRMIETVYRLVNEKNFNSFWCRNQYNHI KGTLKPLLEKVLSFLAAKGLDYRPYISIYNTEAYWDYDDGGKGRAIFFGNWKNVQSFQGVTLSQKDFAWGELVIDEPIEK ELTEELEEIYKIQASNLEILIANTVLRSKNIEGFKTNVTFLYNIFTIDHFLIKDFHNPILPLYSGTDFLKKINLNLAKEL IENTYLQKEDLAFKEGMGIIVTMFSKYFVPKNELSDLQLKQFEALKTKDYKLWMITVAGFAFEEPPERYDYFMKSVLLNK KGNWDRKKCKIINIKQLETKLENEEICGLFYGFDYGLTDNCALVVVLLLSGARIIVLDIFEDIKKLLPKNKRRENKAIYN KVALIVKKWNEYFDKYNFKFYISWLLGNFDSFLYGDNVHSLQWMTEVFINNGINTKLLPASRFKGKKGFGIIDRQVWQKN IFENGLVELLPKAKSLLTLLCQQVIDKEDPKNPNQRNERINKKIYDVINAFEMANTLQNCEYRNYLFNKELKEKNEQNNY