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comparison test-data/rif_resistant_drug_resistance_report.txt @ 3:42818629ec4c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/tbvcfreport commit f54e7cfd572498517dde7fe6afab47a20e3fcb17
author iuc
date Fri, 31 May 2024 20:06:49 +0000
parents 4934c0ac6197
children
comparison
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2:4934c0ac6197 3:42818629ec4c
1 #Rif_resistant Report 1 #Rif_resistant Report
2 #Lineage Family Spoligotype RD Agreement 2 #Lineage Support Family RD
3 lineage2 East-Asian Beijing RD105 1.0 3 lineage2 0.9940119760479041 East-Asian RD105
4 lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 1.0 4 lineage2.2.2 1.0 East-Asian (Beijing) RD105;RD207
5 lineage2.2.2 East-Asian (Beijing) Beijing-RD105/RD207 RD105;RD207 1.0
6 5
7 #TBProfiler Drug Resistance Report 6 #TB-Profiler Drug Resistance Report
8 7
9 #Drug Resistance Supporting Mutations 8 #Drug Resistance Supporting Mutations
10 Isoniazid S 9 Isoniazid S
11 Rifampicin R rpoB(1.0-p.Asp435Val) 10 Rifampicin R rpoB(1.0-p.Asp435Val)
12 Ethambutol S 11 Ethambutol S
18 Capreomycin S 17 Capreomycin S
19 Kanamycin S 18 Kanamycin S
20 Para-aminosalicylic acid S 19 Para-aminosalicylic acid S
21 Linezolid S 20 Linezolid S
22 Cycloserine S 21 Cycloserine S
23 Delaminid S 22 Delamanid S
24 Clofazimine S 23 Clofazimine S
25 Bedaquiline S 24 Bedaquiline S
26 Aminoglycosides S 25 Aminoglycosides S
26 Levofloxacin S
27 Moxifloxacin S
28 Pretomanid S
27 29
28 #Drug resistance predictions are for research purposes only and are produced by the TBProfiler software. 30 #Drug resistance predictions are for research purposes only and are produced by the TB-Profiler software.