Mercurial > repos > iuc > tooldistillator_summarize

comparison test-data/bakta/bakta_gbff.gbff @ 0:05c1bcba20c9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2
author iuc
date Tue, 30 Apr 2024 08:41:54 +0000
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-1:000000000000 0:05c1bcba20c9
1 LOCUS contig_1 1330 bp DNA circular BCT 11-FEB-2024
2 DEFINITION plasmid unnamed1, complete sequence.
3 ACCESSION contig_1
4 VERSION contig_1
5 KEYWORDS .
6 SOURCE None
7 ORGANISM .
8 .
9 COMMENT Annotated with Bakta
10 Software: v1.9.2
11 Database: v5.0, full
12 DOI: 10.1099/mgen.0.000685
13 URL: github.com/oschwengers/bakta
14
15 ##Genome Annotation Summary:##
16 Annotation Date :: 02/11/2024, 00:24:56
17 CDSs :: 2
18 tRNAs :: 0
19 tmRNAs :: 0
20 rRNAs :: 0
21 ncRNAs :: 0
22 regulatory ncRNAs :: 0
23 CRISPR Arrays :: 0
24 oriCs/oriVs :: 0
25 oriTs :: 0
26 gaps :: 0
27 pseudogenes :: 0
28 FEATURES Location/Qualifiers
29 source 1..1330
30 /mol_type="genomic DNA"
31 /plasmid="unnamed1"
32 gene 413..736
33 /locus_tag="IHHALP_00005"
34 CDS 413..736
35 /product="hypothetical protein"
36 /locus_tag="IHHALP_00005"
37 /protein_id="gnl|Bakta|IHHALP_00005"
38 /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
39 AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
40 MAD"
41 /codon_start=1
42 /transl_table=11
43 /inference="ab initio prediction:Prodigal:2.6"
44 gene complement(join(971..1330,1..141))
45 /locus_tag="IHHALP_00010"
46 CDS complement(join(971..1330,1..141))
47 /product="hypothetical protein"
48 /locus_tag="IHHALP_00010"
49 /protein_id="gnl|Bakta|IHHALP_00010"
50 /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
51 EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
52 YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
53 IPI"
54 /codon_start=1
55 /transl_table=11
56 /inference="ab initio prediction:Prodigal:2.6"
57 ORIGIN
58 1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
59 61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
60 121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
61 181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
62 241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
63 301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
64 361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
65 421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
66 481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
67 541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
68 601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
69 661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
70 721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
71 781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
72 841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
73 901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
74 961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
75 1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
76 1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
77 1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
78 1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
79 1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
80 1321 cttctatttg
81 //