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view test-data/out1.align3.fasta @ 1:806fb8363272 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tracy commit 8eb3532d394f6a44d1edbcbe5ef05fd0474cdab3
author iuc
date Thu, 20 Mar 2025 07:18:23 +0000
parents f2e0d83186c7
children
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>Alt1 (Estimated allelic Fraction: 0.63)
ACAGGCATTAATTTACGTGTTTCCTCAGCATGTGCAAGCATTTCTCGCAAATTCCAAGAAACAGTTCCAAGAAT
TTCTTCTTTCTCATTAGAGACAATGGATGGTAGTATGTAAAAAGCGCTCTTGCACTTTTTAAGCACTGTCTTTG
CCTCTTCTAATGTATAACCATTATTACCCTGTCCAGGGTAGGTGGTTATATAATTGTCTACTGGTAACTTCTTT
AATGCTTTTGTAAGCATTTCGGTAGTACCACCAGCTTTTTTAGTAGGTATAACTACAGCAGTTAAAACACCTTC
CTTAATGACATCACCTACTATGTAAGGAGCATCTTTCTTTAGAAAGGTGGTGTCAGTGTCTTTAACAAGCATGG
CAGAATCTGGATGAAGGTTGCCATTAATGTCTATATAAAGTAACAAATTCTCTGTGAGAAACTTAGTTTCTTCC
AAAGTGGTTGTAACTTCTTCAACACAAGCCTTGACTTTCTTTTCTTCAGCCTGTTGCTTTTGTTCAACTGAAGG
TTTATTTTCAGTTGTTGGTGGCTCAACTTCCATTTTAGGAACTTCAGCAATCTGTTGTTCTACTTGTGCCTCAC
TCTTCATTTCTAAAAAGCTAGAAACAAGTTTTTCATAGAGATCTTTGTCAAAGACAGTCAAGTAAACATTTGTG
CGAACAGTGTCTACACAAACTCTTAAGGATTGGACAGGGTCAGCACCAAAGATGCCTGCTGACAATAAAGGTGC
TAGTAAAGTATCATACTGATTGAAATTTTCATATGCAGTTTTAAGAAGTTGAATGCTTTCACCCTTGTTGATAT
TAGGACCAACAACATGAAGACAATTTTTAGCAAGATTATGTCCACTCAGAACACAACTACCACCAACATTCAGA
GGTCCGTTTGTGGCTATGTAATTGTCTGATTCTACTTGCATAGCGTTGTTTGTAGCTTTGTTTAAAGCTCCAGC
AACACCTCCTCCATGTTTAAGTAAACATTAGCTGCATTAACAACTACTGTTGTTTCCCCTGTT
>Alt2 (Estimated allelic Fraction: 0.34)
ACAGGCATTAATTTACGTGTTTCCTCAGCATGTGCAAGCATTTCTCGCAAATTCCAAGAAACAGTTCCAAGAAT
TTCTTCTTTCTCATTAGAGACAATGGATGGTAGTATGTAAAAAGCGCTCTTGCACTTTTTAAGCACTGTCTTTG
CCTCTTCTAATGTATAACCATTATTACCCTGTCCAGGGTAGGTGGTTATATAATTGTCTACTGGTAACTTCTTT
AATGCTTTTGTAAGCATTTCGGTAGTACCACCAGCTTTTTTAGTAGGTATAACTACAGCAGTTAAAACACCTTC
CTTAATGACATCACCTACTATGTAAGGAGCATCTTTCTTTAGAAAGGTGGTGTCAGTGTCTTTAACAAGCATGG
CAGAATCTGGATGAAGGTTGCCATTAATGTCTATATAAAGTAACAAATTCTCTGTGAGAAACTTAGTTTCTTCC
AAAGTGGTTGTAACTTCTTCAACACAAGCCTTGACTTTCTTTTCTTCAGCCTGTTGCTTTTGTTCAACTGAAGG
TTTATTTTCAGTTGTTGGTGGCTCAACTTCCATTTTAGGAACTTCAGCAATCTGTTGTTCTACTTGTGCCTCAC
TCTTCATTTCTAAAAAGCTAGAAACAAGTTTTTCATAGAGATCTTTGTCAAAGACAGTCAAGTAAACATTTGTG
CGAACAGTGTCTACACAAACTCTTAAGGATTGGACAGGGTCAGCACCAAAGATGCCTGCTGACAATAAAGGTGC
TAGTAAAGTATCATACTGATTGAAATTTTCATATGCAGTTTTAAGAAGTTGAATGCTTTCACCCTTGTTGATAT
TAGGACCAACAACATGAAGACAATTTTTAGCAAGATTATGTCCACTCAGAACACAACTACCACCAACATTCAGA
GGTCCGTTTGTGGCTATGTAAATGTCTGAATCTACTTGCATAGCGTTGTTTGTAGCTTTGTTTAAAGCTCCAGC
CACACCTTCTTCATGTTTAAGTAAACATTAGCTGCATTTACAACTACTGTGGTTTCACCTGTT

Alignment score: 3011
#-------------------------------------------------------------------------

Alt1        1 ACAGGCATTAATTTACGTGTTTCCTCAGCATGTGCAAGCATTTCTCGCAAATTCCAAGAA
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2        1 ACAGGCATTAATTTACGTGTTTCCTCAGCATGTGCAAGCATTTCTCGCAAATTCCAAGAA

Alt1       61 ACAGTTCCAAGAATTTCTTCTTTCTCATTAGAGACAATGGATGGTAGTATGTAAAAAGCG
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2       61 ACAGTTCCAAGAATTTCTTCTTTCTCATTAGAGACAATGGATGGTAGTATGTAAAAAGCG

Alt1      121 CTCTTGCACTTTTTAAGCACTGTCTTTGCCTCTTCTAATGTATAACCATTATTACCCTGT
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      121 CTCTTGCACTTTTTAAGCACTGTCTTTGCCTCTTCTAATGTATAACCATTATTACCCTGT

Alt1      181 CCAGGGTAGGTGGTTATATAATTGTCTACTGGTAACTTCTTTAATGCTTTTGTAAGCATT
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      181 CCAGGGTAGGTGGTTATATAATTGTCTACTGGTAACTTCTTTAATGCTTTTGTAAGCATT

Alt1      241 TCGGTAGTACCACCAGCTTTTTTAGTAGGTATAACTACAGCAGTTAAAACACCTTCCTTA
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      241 TCGGTAGTACCACCAGCTTTTTTAGTAGGTATAACTACAGCAGTTAAAACACCTTCCTTA

Alt1      301 ATGACATCACCTACTATGTAAGGAGCATCTTTCTTTAGAAAGGTGGTGTCAGTGTCTTTA
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      301 ATGACATCACCTACTATGTAAGGAGCATCTTTCTTTAGAAAGGTGGTGTCAGTGTCTTTA

Alt1      361 ACAAGCATGGCAGAATCTGGATGAAGGTTGCCATTAATGTCTATATAAAGTAACAAATTC
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      361 ACAAGCATGGCAGAATCTGGATGAAGGTTGCCATTAATGTCTATATAAAGTAACAAATTC

Alt1      421 TCTGTGAGAAACTTAGTTTCTTCCAAAGTGGTTGTAACTTCTTCAACACAAGCCTTGACT
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      421 TCTGTGAGAAACTTAGTTTCTTCCAAAGTGGTTGTAACTTCTTCAACACAAGCCTTGACT

Alt1      481 TTCTTTTCTTCAGCCTGTTGCTTTTGTTCAACTGAAGGTTTATTTTCAGTTGTTGGTGGC
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      481 TTCTTTTCTTCAGCCTGTTGCTTTTGTTCAACTGAAGGTTTATTTTCAGTTGTTGGTGGC

Alt1      541 TCAACTTCCATTTTAGGAACTTCAGCAATCTGTTGTTCTACTTGTGCCTCACTCTTCATT
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      541 TCAACTTCCATTTTAGGAACTTCAGCAATCTGTTGTTCTACTTGTGCCTCACTCTTCATT

Alt1      601 TCTAAAAAGCTAGAAACAAGTTTTTCATAGAGATCTTTGTCAAAGACAGTCAAGTAAACA
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      601 TCTAAAAAGCTAGAAACAAGTTTTTCATAGAGATCTTTGTCAAAGACAGTCAAGTAAACA

Alt1      661 TTTGTGCGAACAGTGTCTACACAAACTCTTAAGGATTGGACAGGGTCAGCACCAAAGATG
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      661 TTTGTGCGAACAGTGTCTACACAAACTCTTAAGGATTGGACAGGGTCAGCACCAAAGATG

Alt1      721 CCTGCTGACAATAAAGGTGCTAGTAAAGTATCATACTGATTGAAATTTTCATATGCAGTT
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      721 CCTGCTGACAATAAAGGTGCTAGTAAAGTATCATACTGATTGAAATTTTCATATGCAGTT

Alt1      781 TTAAGAAGTTGAATGCTTTCACCCTTGTTGATATTAGGACCAACAACATGAAGACAATTT
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      781 TTAAGAAGTTGAATGCTTTCACCCTTGTTGATATTAGGACCAACAACATGAAGACAATTT

Alt1      841 TTAGCAAGATTATGTCCACTCAGAACACAACTACCACCAACATTCAGAGGTCCGTTTGTG
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alt2      841 TTAGCAAGATTATGTCCACTCAGAACACAACTACCACCAACATTCAGAGGTCCGTTTGTG

Alt1      901 GCTATGTAATTGTCTGATTCTACTTGCATAGCGTTGTTTGTAGCTTTGTTTAAAGCTCCA
              ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Alt2      901 GCTATGTAAATGTCTGAATCTACTTGCATAGCGTTGTTTGTAGCTTTGTTTAAAGCTCCA

Alt1      961 GCAACACCTCCTCCATGTTTAAGTAAACATTAGCTGCATTAACAACTACTGTTGTTTCCC
              || |||||| || ||||||||||||||||||||||||||| ||||||||||| ||||| |
Alt2      961 GCCACACCTTCTTCATGTTTAAGTAAACATTAGCTGCATTTACAACTACTGTGGTTTCAC

Alt1     1021 CTGTT
              |||||
Alt2     1021 CTGTT

#-------------------------------------------------------------------------
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